C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytoskeleton-associated protein 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046841 Ckap4 10090 - 10:84526305-84534036 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053871 Ckap4-201 84526305-84533888 protein_coding
  ENSMUST00000167671 Ckap4-202 84526636-84534036 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053871ENSMUST00000167671
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053871 16.606±10.11 10.468±0.93 22.221±2.06 14.992±8.01 9.727±2.28 16.991±4.21 9.092±0.74 3.759±0.75 3.633±2.95 14.430±1.35 1.971±0.34 48.364±12.83 48.174±18.89 25.900±10.04
ENSMUST00000167671 1.556±0.00 5.826±2.68 N/A 0.683±0.00 2.375±0.90 6.897±5.03 N/A N/A 0.114±0.00 N/A N/A 11.864±2.58 N/A 4.250±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021I CIL_00021I_0002 CGP 10:84370905-84534036
CIL_0005RH CIL_0005RH_0002 CGP 10:84526305-84614359

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0005811 IEA lipid particle
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000136026 CKAP4 cytoskeleton-associated protein 4 protein_coding Homo_sapiens

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