C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytoskeleton-associated protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167671 Ckap4-202 ENSMUSG00000046841 10090 - 10:84526636-84534036 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverOvaryTestisENSMUST00000167671
Transcript ID Adipose Adrenal Brain Breast Colon Liver Ovary Testis
ENSMUST00000167671 1.556±0.00 5.826±2.68 0.683±0.00 2.375±0.90 6.897±5.03 0.114±0.00 11.864±2.58 4.250±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021I CIL_00021I_0002 CGP 10:84370905-84534036
CIL_0005RH CIL_0005RH_0002 CGP 10:84526305-84614359

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378026 CKAP4-001 protein_coding Homo_sapiens 0 1417
ENST00000552828 CKAP4-007 processed_transcript Homo_sapiens 0 435

Loading