C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005RH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136026-ENSG00000166046 CGP 9606 12:106237877-106347015
GeneTranscriptPositionBiotype
ENSG00000136026 (CKAP4)
cytoskeleton-associated protein 4 		ENST00000378026 (CKAP4-001) 106237877-106247988 protein_coding
ENST00000552828 (CKAP4-007) 106239894-106304251 processed_transcript
ENST00000553039 (CKAP4-006) 106240322-106304279 protein_coding
ENSG00000166046 (TCP11L2)
t-complex 11, testis-specific-like 2 		ENST00000299045 (TCP11L2-001) 106302803-106347015 protein_coding
ENST00000546625 (TCP11L2-004) 106302818-106325913 protein_coding
ENST00000547153 (TCP11L2-002) 106302803-106330171 protein_coding
ENST00000548428 (TCP11L2-005) 106303493-106314493 protein_coding
ENST00000549906 (TCP11L2-008) 106302853-106314468 nonsense_mediated_decay
ENST00000551228 (TCP11L2-006) 106303865-106311128 protein_coding
ENST00000551802 (TCP11L2-009) 106303060-106318445 protein_coding
ENST00000552690 (TCP11L2-010) 106321574-106324056 processed_transcript
ENST00000553098 (TCP11L2-007) 106302833-106323576 protein_coding
ENST00000553143 (TCP11L2-003) 106301929-106311128 protein_coding
ENSG00000258355 (RP11-651L5.2)
 ENST00000552486 (RP11-651L5.2-001) 106245613-106246956 sense_intronic
ENSG00000277715 (RP11-651L5.3)
 ENST00000611145 (RP11-651L5.3-001) 106250759-106252786 antisense
CIL_0005RH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046841-ENSMUSG00000020034 CGP 10090 10:84526305-84614359
GeneTranscriptPositionBiotype
ENSMUSG00000020034 (Tcp11l2)
t-complex 11 (mouse) like 2 		ENSMUST00000020223 (Tcp11l2-001) 84576626-84614359 protein_coding
ENSMUST00000160057 (Tcp11l2-003) 84594653-84604990 retained_intron
ENSMUST00000162874 (Tcp11l2-002) 84576897-84595300 retained_intron
ENSMUSG00000046841 (Ckap4)
cytoskeleton-associated protein 4 		ENSMUST00000053871 (Ckap4-201) 84526305-84533888 protein_coding
ENSMUST00000167671 (Ckap4-202) 84526636-84534036 protein_coding
ENSMUSG00000097076 (C330046G13Rik)
RIKEN cDNA C330046G13 gene 		ENSMUST00000181466 (C330046G13Rik-201) 84547417-84553338 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005RH_0001ENSG00000136026ENST00000378026ENST00000552828ENST00000553039ENSG00000166046ENST00000299045ENST00000546625ENST00000547153ENST00000548428ENST00000549906ENST00000551228ENST00000551802ENST00000552690ENST00000553098ENST00000553143ENSG00000258355ENST00000552486ENSG00000277715ENST00000611145CIL_0005RH_0002ENSMUSG00000020034ENSMUST00000020223ENSMUST00000160057ENSMUST00000162874ENSMUSG00000046841ENSMUST00000053871ENSMUST00000167671ENSMUSG00000097076ENSMUST00000181466
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005RH_0001ENSG00000136026ENST00000378026ENSG00000166046ENST00000299045ENSG00000258355ENST00000552486ENSG00000277715ENST00000611145CIL_0005RH_0002ENSMUSG00000020034ENSMUST00000020223ENSMUST00000160057ENSMUST00000162874ENSMUSG00000046841ENSMUST00000053871ENSMUST00000167671ENSMUSG00000097076ENSMUST00000181466
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136026 ENST00000378026 31.078±0.00 26.572±0.00 2.113±0.00 7.090±5.67 11.373±5.71 13.727±10.00 10.508±7.62 17.318±14.64 13.051±7.05 20.935±17.61 7.481±0.00 29.772±21.41 62.340±3.19 17.509±11.98
ENST00000552828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166046 ENST00000299045 N/A N/A N/A 2.145±0.80 4.621±0.00 3.308±0.69 7.485±0.00 1.573±0.00 3.282±0.00 4.812±0.19 2.680±0.00 4.657±0.00 N/A 2.369±0.00
ENST00000546625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258355 ENST00000552486 N/A 0.064±0.00 N/A 0.154±0.00 N/A 0.061±0.00 N/A 0.268±0.00 N/A 2.035±0.00 N/A N/A N/A N/A
ENSG00000277715 ENST00000611145 0.126±0.00 0.333±0.00 N/A 0.490±0.21 0.148±0.09 0.189±0.00 0.128±0.05 0.356±0.00 0.025±0.00 0.172±0.08 0.210±0.00 0.567±0.30 0.076±0.03 0.427±0.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020034 ENSMUST00000020223 8.295±0.81 2.988±0.72 13.322±0.34 3.844±2.30 8.402±3.56 2.639±0.53 25.444±1.00 5.836±0.75 14.323±10.94 11.718±1.80 13.345±1.16 8.227±5.75 2.736±1.93 3.662±1.83
ENSMUST00000160057 N/A N/A N/A 2.464±0.00 N/A N/A N/A N/A N/A N/A N/A 4.361±0.00 2.886±1.20 N/A
ENSMUST00000162874 11.574±3.63 23.757±2.08 N/A 0.970±0.66 27.354±8.76 8.700±5.40 25.485±7.89 5.891±1.55 7.193±0.83 31.263±2.64 N/A 59.578±31.41 N/A 2.006±0.99
ENSMUSG00000046841 ENSMUST00000053871 16.606±10.11 10.468±0.93 22.221±2.06 14.992±8.01 9.727±2.28 16.991±4.21 9.092±0.74 3.759±0.75 3.633±2.95 14.430±1.35 1.971±0.34 48.364±12.83 48.174±18.89 25.900±10.04
ENSMUST00000167671 1.556±0.00 5.826±2.68 N/A 0.683±0.00 2.375±0.90 6.897±5.03 N/A N/A 0.114±0.00 N/A N/A 11.864±2.58 N/A 4.250±0.33
ENSMUSG00000097076 ENSMUST00000181466 N/A N/A N/A 0.032±0.02 0.047±0.00 N/A N/A 0.064±0.03 0.037±0.03 0.051±0.03 0.094±0.05 0.052±0.03 0.176±0.09 0.033±0.01

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