C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: teashirt zinc finger family member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046982 Tshz1 10090 - 18:84011627-84086404 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000060303 Tshz1-001 84011627-84086404 protein_coding
  ENSMUST00000175783 Tshz1-002 84012082-84086390 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060303ENSMUST00000175783
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060303 2.878±1.38 2.657±0.51 4.169±0.15 3.269±0.52 1.048±0.40 2.965±0.65 1.483±0.34 2.131±0.28 0.722±0.31 2.156±0.27 1.629±0.51 6.443±4.09 1.242±0.62 0.585±0.11
ENSMUST00000175783 6.580±3.70 10.426±1.64 4.801±2.26 4.265±2.47 4.307±1.61 12.647±1.48 4.066±0.64 4.900±2.46 1.589±0.85 5.871±0.23 0.576±0.24 22.650±8.83 1.234±0.71 0.835±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007J6 CIL_0007J6_0003 UCNEbase 18:83110562-84557428
CIL_000995 CIL_000995_0002 VISTA 18:83942068-84543225

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0009952 IMP anterior/posterior pattern specification
GO:0042474 IMP middle ear morphogenesis
GO:0046872 IEA metal ion binding
GO:0060023 IMP soft palate development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005026 tshz1 teashirt family zinc finger 1 protein_coding Danio_rerio
ENSG00000179981 TSHZ1 teashirt zinc finger homeobox 1 protein_coding Homo_sapiens

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