C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007J6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
TSHZ1 UCNEbase 9606 18:74636406-75128580
GeneTranscriptPositionBiotype
ENSG00000215421 (ZNF407)
zinc finger protein 407 		ENST00000299687 (ZNF407-001) 74631020-75065669 protein_coding
ENST00000309902 (ZNF407-201) 74630963-74804624 protein_coding
ENST00000577538 (ZNF407-006) 74631020-74921058 protein_coding
ENST00000579200 (ZNF407-003) 75061282-75065671 retained_intron
ENST00000581829 (ZNF407-005) 74877205-74898443 protein_coding
ENST00000582214 (ZNF407-007) 75060155-75063485 processed_transcript
ENST00000582337 (ZNF407-002) 74597870-74804627 protein_coding
ENST00000584235 (ZNF407-004) 74877198-74905938 protein_coding
ENSG00000273669 (RP11-405M12.4)
 ENST00000613588 (RP11-405M12.4-001) 75073543-75074205 lincRNA
ENSG00000278607 (RP11-405M12.3)
 ENST00000618730 (RP11-405M12.3-001) 75070197-75071091 lincRNA
ENSG00000278911 (RP11-405M12.2)
 ENST00000624305 (RP11-405M12.2-001) 75103587-75106260 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0007J6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
TSHZ1 UCNEbase 9606 18:75128581-76219630
GeneTranscriptPositionBiotype
ENSG00000179981 (TSHZ1)
teashirt zinc finger homeobox 1 		ENST00000322038 (TSHZ1-001) 75210755-75289950 protein_coding
ENST00000560661 (TSHZ1-003) 75244576-75285778 protein_coding
ENST00000560918 (TSHZ1-002) 75221058-75286372 protein_coding
ENST00000580243 (TSHZ1-005) 75211529-75288641 protein_coding
ENST00000584217 (TSHZ1-004) 75282864-75289943 retained_intron
ENSG00000180011 (ZADH2)
zinc binding alcohol dehydrogenase domain containing 2 		ENST00000322342 (ZADH2-001) 75195108-75209348 protein_coding
ENST00000537114 (ZADH2-002) 75199457-75205513 protein_coding
ENST00000581620 (ZADH2-004) 75201878-75208417 protein_coding
ENST00000582437 (ZADH2-003) 75201717-75208466 protein_coding
ENSG00000206026 (SMIM21)
small integral membrane protein 21 		ENST00000382638 (SMIM21-003) 75409872-75427634 protein_coding
ENST00000579022 (SMIM21-001) 75409476-75427703 protein_coding
ENST00000584508 (SMIM21-002) 75416018-75427682 protein_coding
ENSG00000261194 (RP11-704C2.1)
 ENST00000564156 (RP11-704C2.1-001) 75696079-75712385 lincRNA
ENSG00000264116 (RP11-321M21.3)
 ENST00000578340 (RP11-321M21.3-001) 75407012-75419014 antisense
ENST00000579386 (RP11-321M21.3-002) 75408038-75419040 antisense
ENSG00000264260 (RP11-94B19.1)
 ENST00000581750 (RP11-94B19.1-001) 76209510-76215702 lincRNA
ENSG00000266743 (RP11-94B19.6)
 ENST00000578035 (RP11-94B19.6-001) 76173304-76177738 lincRNA
ENSG00000266774 (RP11-321M21.1)
 ENST00000579278 (RP11-321M21.1-001) 75432703-75436957 lincRNA
ENSG00000276993 (RP11-321M21.4)
 ENST00000612669 (RP11-321M21.4-001) 75387056-75387596 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0007J6_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
TSHZ1 UCNEbase 10090 18:83110562-84557428
GeneTranscriptPositionBiotype
ENSMUSG00000046982 (Tshz1)
teashirt zinc finger family member 1 		ENSMUST00000060303 (Tshz1-001) 84011627-84086404 protein_coding
ENSMUST00000175783 (Tshz1-002) 84012082-84086390 processed_transcript
ENSMUSG00000049090 (Zadh2)
zinc binding alcohol dehydrogenase, domain containing 2 		ENSMUST00000060223 (Zadh2-201) 84088158-84097514 protein_coding

Mus musculus Ensembl (GRCm38)

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CIL_0007J6_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
TSHZ1 UCNEbase 7955 19:21320168-22134225
GeneTranscriptPositionBiotype
ENSDARG00000005026 (tshz1)
teashirt family zinc finger 1 		ENSDART00000024639 (tshz1-201) 21891006-21895246 protein_coding
ENSDART00000122002 (tshz1-001) 21844850-21895804 protein_coding
ENSDARG00000096358 (si:ch211-129n15.7)
si:ch211-129n15.7 		ENSDART00000151466 (si:ch211-129n15.7-001) 21313376-21335597 lincRNA

Danio rerio Ensembl (Zv9)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007J6_0001ENSG00000215421ENST00000299687ENST00000309902ENST00000577538ENST00000579200ENST00000581829ENST00000582214ENST00000582337ENST00000584235ENSG00000273669ENST00000613588ENSG00000278607ENST00000618730ENSG00000278911ENST00000624305CIL_0007J6_0002ENSG00000179981ENST00000322038ENST00000560661ENST00000560918ENST00000580243ENST00000584217ENSG00000180011ENST00000322342ENST00000537114ENST00000581620ENST00000582437ENSG00000206026ENST00000382638ENST00000579022ENST00000584508ENSG00000261194ENST00000564156ENSG00000264116ENST00000578340ENST00000579386ENSG00000264260ENST00000581750ENSG00000266743ENST00000578035ENSG00000266774ENST00000579278ENSG00000276993ENST00000612669CIL_0007J6_0003ENSMUSG00000046982ENSMUST00000060303ENSMUST00000175783ENSMUSG00000049090ENSMUST00000060223CIL_0007J6_0004ENSDARG00000005026ENSDART00000024639ENSDART00000122002ENSDARG00000096358ENSDART00000151466
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007J6_0001ENSG00000215421ENST00000299687ENST00000309902ENST00000577538ENST00000582337ENSG00000273669ENST00000613588ENSG00000278607ENST00000618730ENSG00000278911ENST00000624305CIL_0007J6_0002ENSG00000179981ENST00000322038ENST00000580243ENST00000584217ENSG00000180011ENST00000322342ENST00000537114ENST00000582437ENSG00000206026ENST00000382638ENST00000579022ENST00000584508ENSG00000261194ENST00000564156ENSG00000264116ENST00000578340ENST00000579386ENSG00000264260ENST00000581750ENSG00000266743ENST00000578035ENSG00000266774ENST00000579278ENSG00000276993ENST00000612669CIL_0007J6_0003ENSMUSG00000046982ENSMUST00000060303ENSMUST00000175783ENSMUSG00000049090ENSMUST00000060223CIL_0007J6_0004ENSDARG00000005026ENSDART00000024639ENSDART00000122002ENSDARG00000096358ENSDART00000151466
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000215421 ENST00000299687 0.639±0.00 N/A 0.432±0.00 1.321±0.42 0.464±0.05 0.793±0.35 0.521±0.18 0.864±0.00 0.449±0.00 0.719±0.26 1.334±0.00 0.610±0.19 0.386±0.19 1.476±0.78
ENST00000309902 N/A N/A N/A 0.340±0.00 0.714±0.00 0.938±0.00 N/A N/A 1.776±0.00 N/A N/A 1.325±0.00 N/A N/A
ENST00000577538 N/A N/A N/A N/A N/A 3.242±0.00 0.600±0.00 N/A 1.326±0.00 N/A N/A 0.714±0.00 N/A N/A
ENST00000579200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582337 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.620±0.00 N/A N/A N/A N/A
ENST00000584235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000273669 ENST00000613588 0.529±0.00 1.791±0.00 N/A 0.855±0.00 0.131±0.00 0.497±0.00 0.057±0.00 0.248±0.00 0.321±0.00 0.419±0.00 N/A 0.178±0.08 0.447±0.13 0.486±0.00
ENSG00000278607 ENST00000618730 N/A N/A N/A N/A 0.038±0.00 N/A 0.105±0.00 1.686±0.00 0.034±0.00 0.073±0.00 N/A 0.357±0.00 0.401±0.00 0.102±0.00
ENSG00000278911 ENST00000624305 0.037±0.00 0.099±0.00 0.160±0.00 0.273±0.05 0.038±0.00 0.110±0.00 0.058±0.00 0.119±0.00 0.011±0.00 0.097±0.00 0.027±0.00 0.012±0.00 0.022±0.00 0.035±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000179981 ENST00000322038 14.127±0.00 2.066±0.00 1.202±0.00 2.675±1.03 0.941±0.02 3.195±0.00 1.210±0.39 1.369±0.70 2.153±0.00 2.831±0.68 1.155±0.32 3.672±2.56 3.787±0.92 2.096±0.75
ENST00000560661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580243 7.853±0.00 N/A N/A N/A 1.606±0.00 N/A 1.057±0.00 N/A N/A 3.002±0.00 0.792±0.00 21.499±0.00 2.299±0.00 N/A
ENST00000584217 N/A N/A 0.588±0.00 N/A 0.323±0.00 0.510±0.00 N/A N/A N/A N/A N/A 0.447±0.00 N/A N/A
ENSG00000180011 ENST00000322342 0.815±0.00 1.155±0.00 0.162±0.00 2.419±0.19 1.080±0.83 3.480±0.00 0.863±0.20 2.486±0.00 1.446±0.05 1.205±0.00 2.751±0.00 1.666±1.01 1.561±0.76 1.137±0.00
ENST00000537114 3.541±0.00 2.062±0.00 1.706±0.00 3.123±0.10 1.333±0.55 3.391±0.70 2.304±0.74 3.392±1.11 2.391±0.31 2.845±0.50 2.994±1.59 2.731±1.44 4.088±1.08 1.417±0.76
ENST00000581620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.758±0.00 12.773±0.00 3.178±0.00
ENSG00000206026 ENST00000382638 N/A N/A N/A 0.021±0.00 0.010±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579022 N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A 0.586±0.34
ENST00000584508 N/A N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A 1.121±0.22
ENSG00000261194 ENST00000564156 N/A 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.796±0.35
ENSG00000264116 ENST00000578340 N/A N/A N/A 0.027±0.00 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A N/A
ENSG00000264260 ENST00000581750 N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A N/A N/A 0.090±0.00 0.146±0.07
ENSG00000266743 ENST00000578035 N/A N/A N/A N/A N/A 0.099±0.00 0.159±0.00 N/A N/A N/A N/A 0.492±0.00 0.332±0.23 0.239±0.02
ENSG00000266774 ENST00000579278 N/A N/A N/A 0.056±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.189±0.00
ENSG00000276993 ENST00000612669 N/A 0.092±0.00 N/A 0.067±0.00 N/A 0.115±0.00 N/A N/A N/A N/A N/A 0.086±0.00 N/A 0.117±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000046982 ENSMUST00000060303 2.878±1.38 2.657±0.51 4.169±0.15 3.269±0.52 1.048±0.40 2.965±0.65 1.483±0.34 2.131±0.28 0.722±0.31 2.156±0.27 1.629±0.51 6.443±4.09 1.242±0.62 0.585±0.11
ENSMUST00000175783 6.580±3.70 10.426±1.64 4.801±2.26 4.265±2.47 4.307±1.61 12.647±1.48 4.066±0.64 4.900±2.46 1.589±0.85 5.871±0.23 0.576±0.24 22.650±8.83 1.234±0.71 0.835±0.31
ENSMUSG00000049090 ENSMUST00000060223 24.513±5.53 43.363±3.86 18.854±2.99 3.964±0.47 22.292±2.24 19.062±0.99 17.420±1.24 16.636±1.19 17.139±11.84 14.456±0.50 13.277±0.84 31.709±4.02 3.282±1.77 2.976±1.44
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005026 ENSDART00000024639 N/A N/A N/A N/A N/A N/A 1.120±0.00 3.372±0.51 N/A N/A 0.993±0.00 N/A N/A N/A
ENSDART00000122002 N/A N/A N/A 1.322±0.29 N/A N/A 0.120±0.04 0.465±0.04 N/A N/A 0.506±0.00 N/A N/A N/A
ENSDARG00000096358 ENSDART00000151466 N/A N/A N/A 0.443±0.24 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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