C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: teashirt zinc finger family member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000060303 Tshz1-001 ENSMUSG00000046982 10090 - 18:84011627-84086404 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060303
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060303 2.878±1.38 2.657±0.51 4.169±0.15 3.269±0.52 1.048±0.40 2.965±0.65 1.483±0.34 2.131±0.28 0.722±0.31 2.156±0.27 1.629±0.51 6.443±4.09 1.242±0.62 0.585±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007J6 CIL_0007J6_0003 UCNEbase 18:83110562-84557428
CIL_000995 CIL_000995_0002 VISTA 18:83942068-84543225

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0009952 IMP anterior/posterior pattern specification
GO:0042474 IMP middle ear morphogenesis
GO:0046872 IEA metal ion binding
GO:0060023 IMP soft palate development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322038 TSHZ1-001 protein_coding Homo_sapiens 0 3664
ENST00000560918 TSHZ1-002 protein_coding Homo_sapiens 0 1086
ENST00000580243 TSHZ1-005 protein_coding Homo_sapiens 0 3919
ENST00000584217 TSHZ1-004 retained_intron Homo_sapiens 0 3666

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