C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 108
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000094844 Ccdc108-001 ENSMUSG00000047021 10090 - 1:74902071-74935599 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartLiverLungOvaryPlacentaTestisENSMUST00000094844
Transcript ID Adipose Brain Colon Heart Liver Lung Ovary Placenta Testis
ENSMUST00000094844 0.007±0.00 0.615±0.11 0.050±0.02 0.137±0.13 0.004±0.00 3.467±0.00 3.387±1.23 0.006±0.00 37.817±8.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ED CIL_0006ED_0002 CGP 1:74889934-74935599
CIL_0006EC CIL_0006EC_0002 CGP 1:74902071-74951672

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341552 CCDC108-001 protein_coding Homo_sapiens 0 3620
ENST00000409865 CCDC108-005 protein_coding Homo_sapiens 0 1411
ENST00000410037 CCDC108-004 protein_coding Homo_sapiens 0 1411
ENST00000441968 CCDC108-201 protein_coding Homo_sapiens 0 350
ENST00000453220 CCDC108-202 protein_coding Homo_sapiens 0 3620
ENST00000457968 CCDC108-011 protein_coding Homo_sapiens 0 278
ENST00000462848 CCDC108-003 retained_intron Homo_sapiens 0 350

Loading