C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neugrin, neurite outgrowth associated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138005 Ngrn-002 ENSMUSG00000047084 10090 + 7:80261220-80265374 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000138005
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000138005 6.202±1.05 29.748±4.29 12.346±3.62 18.219±7.48 11.846±3.96 7.318±0.84 2.787±0.23 5.214±0.87 6.788±4.37 12.997±1.88 2.487±0.51 14.654±4.47 3.577±1.88 4.107±1.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AY CIL_0008AY_0002 VISTA 7:80145068-80746500
CIL_0003H1 CIL_0003H1_0002 CGP 7:80246376-80265374

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331497 NGRN-001 processed_transcript Homo_sapiens 0 745
ENST00000379095 NGRN-002 protein_coding Homo_sapiens 5e-29 135
ENST00000403583 RP1-288M22.1-001 processed_pseudogene Homo_sapiens 0 374

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