C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700113H08 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047129 1700113H08Rik 10090 + 10:87058045-87230589 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000169849 1700113H08Rik-001 87058046-87230588 protein_coding
  ENSMUST00000189456 1700113H08Rik-003 87058045-87230589 protein_coding
  ENSMUST00000189775 1700113H08Rik-002 87205979-87230587 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000169849ENSMUST00000189456ENSMUST00000189775
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000169849 0.100±0.03 0.058±0.00 0.012±0.00 0.099±0.03 N/A 0.135±0.00 N/A 0.026±0.02 N/A 0.342±0.28 N/A 0.031±0.00 24.283±10.30
ENSMUST00000189456 0.105±0.00 N/A 0.023±0.01 0.119±0.00 N/A 0.133±0.00 0.079±0.00 0.042±0.02 0.126±0.00 0.454±0.14 0.050±0.00 N/A 3.079±0.00
ENSMUST00000189775 N/A 0.087±0.00 0.035±0.00 0.122±0.01 0.151±0.00 0.119±0.00 0.061±0.02 0.124±0.00 0.056±0.01 0.558±0.00 0.127±0.05 0.016±0.00 78.102±15.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WM CIL_0007WM_0002 VISTA 10:86992836-87593886
CIL_00083Z CIL_00083Z_0002 VISTA 10:87024267-87626929

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000179088 C12orf42 chromosome 12 open reading frame 42 protein_coding Homo_sapiens

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