C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007WM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1723 VISTA 9606 12:102920166-103521542
GeneTranscriptPositionBiotype
ENSG00000139352 (ASCL1)
achaete-scute family bHLH transcription factor 1 		ENST00000266744 (ASCL1-001) 102957686-102960516 protein_coding
ENSG00000171759 (PAH)
phenylalanine hydroxylase 		ENST00000307000 (PAH-002) 102838321-102917254 protein_coding
ENST00000546708 (PAH-007) 102917172-102950850 processed_transcript
ENST00000546844 (PAH-009) 102894735-102950846 protein_coding
ENST00000547319 (PAH-004) 102916573-102958410 processed_transcript
ENST00000548677 (PAH-010) 102894803-102915192 processed_transcript
ENST00000548928 (PAH-011) 102886045-102912880 processed_transcript
ENST00000549111 (PAH-003) 102854686-102917226 retained_intron
ENST00000549247 (PAH-014) 102843646-102853415 retained_intron
ENST00000550405 (PAH-008) 102946582-102950845 retained_intron
ENST00000550978 (PAH-012) 102877286-102917114 retained_intron
ENST00000551114 (PAH-015) 102843714-102852260 retained_intron
ENST00000551337 (PAH-005) 102877495-102958366 protein_coding
ENST00000551988 (PAH-013) 102855279-102917219 processed_transcript
ENST00000552251 (PAH-006) 102945088-102950868 processed_transcript
ENST00000553106 (PAH-001) 102836885-102917603 protein_coding
ENSG00000179088 (C12orf42)
chromosome 12 open reading frame 42 		ENST00000378113 (C12orf42-201) 103301943-103496010 protein_coding
ENST00000546526 (C12orf42-006) 103268542-103495958 processed_transcript
ENST00000547347 (C12orf42-004) 103237591-103495968 nonsense_mediated_decay
ENST00000547470 (C12orf42-015) 103262267-103267892 processed_transcript
ENST00000548048 (C12orf42-003) 103301955-103495966 protein_coding
ENST00000548196 (C12orf42-005) 103476900-103495971 processed_transcript
ENST00000548789 (C12orf42-008) 103305974-103495946 processed_transcript
ENST00000548883 (C12orf42-001) 103301943-103495968 protein_coding
ENST00000549927 (C12orf42-013) 103262270-103269853 processed_transcript
ENST00000550497 (C12orf42-009) 103349123-103495925 processed_transcript
ENST00000550650 (C12orf42-011) 103267609-103441591 processed_transcript
ENST00000551134 (C12orf42-002) 103301955-103495971 nonsense_mediated_decay
ENST00000551303 (C12orf42-014) 103263308-103267925 processed_transcript
ENST00000552372 (C12orf42-012) 103396493-103456275 processed_transcript
ENST00000552578 (C12orf42-007) 103305982-103495953 protein_coding
ENST00000552977 (C12orf42-010) 103269820-103441595 processed_transcript
ENSG00000257415 (RP11-626I20.1)
 ENST00000551967 (RP11-626I20.1-001) 103503381-103504936 processed_pseudogene
ENSG00000257703 (RP11-328J6.1)
 ENST00000548415 (RP11-328J6.1-001) 103081090-103178401 lincRNA
ENST00000548594 (RP11-328J6.1-002) 103080950-103178675 lincRNA
ENSG00000257860 (RP11-552I14.1)
 ENST00000547418 (RP11-552I14.1-002) 103151842-103168234 lincRNA
ENST00000549568 (RP11-552I14.1-003) 103162856-103168309 lincRNA
ENST00000550664 (RP11-552I14.1-005) 103162911-103168309 lincRNA
ENST00000552759 (RP11-552I14.1-001) 103151855-103161642 lincRNA
CIL_0007WM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1723 VISTA 10090 10:86992836-87593886
GeneTranscriptPositionBiotype
ENSMUSG00000020051 (Pah)
phenylalanine hydroxylase 		ENSMUST00000020241 (Pah-001) 87521795-87584136 protein_coding
ENSMUST00000133293 (Pah-002) 87546673-87570332 protein_coding
ENSMUST00000142088 (Pah-004) 87521930-87584034 protein_coding
ENSMUST00000143624 (Pah-003) 87522027-87583855 protein_coding
ENSMUSG00000020052 (Ascl1)
achaete-scute complex homolog 1 (Drosophila) 		ENSMUST00000020243 (Ascl1-001) 87490819-87493660 protein_coding
ENSMUSG00000035459 (Stab2)
stabilin 2 		ENSMUST00000035288 (Stab2-001) 86841198-87008025 protein_coding
ENSMUST00000099390 (Stab2-002) 86992512-87008022 processed_transcript
ENSMUST00000159023 (Stab2-007) 86871859-86878958 retained_intron
ENSMUST00000159118 (Stab2-006) 86873828-86885749 retained_intron
ENSMUST00000160580 (Stab2-003) 86918662-86940640 processed_transcript
ENSMUST00000161560 (Stab2-004) 86841321-86891606 nonsense_mediated_decay
ENSMUST00000163045 (Stab2-005) 86990829-87008012 processed_transcript
ENSMUSG00000047129 (1700113H08Rik)
RIKEN cDNA 1700113H08 gene 		ENSMUST00000169849 (1700113H08Rik-001) 87058046-87230588 protein_coding
ENSMUST00000189456 (1700113H08Rik-003) 87058045-87230589 protein_coding
ENSMUST00000189775 (1700113H08Rik-002) 87205979-87230587 protein_coding
ENSMUSG00000089656 (Gm16271)
predicted gene 16271 		ENSMUST00000162837 (Gm16271-001) 86972216-87028015 antisense
ENSMUSG00000089666 (Gm16269)
predicted gene 16269 		ENSMUST00000160532 (Gm16269-001) 87000297-87000705 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007WM_0001ENSG00000139352ENST00000266744ENSG00000171759ENST00000307000ENST00000546708ENST00000546844ENST00000548928ENST00000549111ENST00000549247ENST00000551114ENST00000551988ENST00000552251ENSG00000179088ENST00000378113ENST00000546526ENST00000547347ENST00000547470ENST00000548196ENST00000548883ENST00000550497ENST00000552578ENST00000552977ENSG00000257415ENST00000551967ENSG00000257703ENST00000548415ENST00000548594ENSG00000257860ENST00000547418ENST00000550664ENST00000552759CIL_0007WM_0002ENSMUSG00000020051ENSMUST00000020241ENSMUST00000133293ENSMUST00000142088ENSMUST00000143624ENSMUSG00000020052ENSMUST00000020243ENSMUSG00000035459ENSMUST00000035288ENSMUST00000160580ENSMUST00000161560ENSMUSG00000047129ENSMUST00000169849ENSMUST00000189456ENSMUST00000189775ENSMUSG00000089656ENSMUST00000162837ENSMUSG00000089666ENSMUST00000160532
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139352 ENST00000266744 0.021±0.00 0.047±0.00 N/A 4.520±1.32 0.013±0.00 0.053±0.00 0.013±0.00 N/A N/A 0.028±0.00 0.055±0.00 0.123±0.02 0.047±0.02 0.453±0.00
ENSG00000171759 ENST00000307000 N/A N/A N/A 0.781±0.21 0.303±0.00 0.016±0.00 0.039±0.00 39.829±34.42 N/A N/A N/A 0.033±0.01 N/A 0.520±0.02
ENST00000546708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.695±0.00
ENST00000546844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.038±0.00 N/A 3.732±0.00
ENST00000547319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.534±0.00 N/A N/A N/A
ENST00000549111 N/A N/A N/A N/A 0.326±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549247 N/A N/A 49.264±0.00 N/A N/A N/A N/A N/A 0.251±0.00 N/A N/A N/A N/A N/A
ENST00000550405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A
ENST00000551337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551988 N/A N/A 62.732±0.00 N/A N/A N/A N/A N/A 0.312±0.00 N/A N/A N/A N/A N/A
ENST00000552251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.906±2.02
ENST00000553106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000179088 ENST00000378113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.054±0.00 5.888±2.14
ENST00000546526 N/A N/A N/A N/A 0.056±0.00 N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A
ENST00000547347 N/A N/A N/A 0.012±0.00 0.074±0.00 N/A N/A N/A N/A N/A N/A 0.018±0.00 0.020±0.00 N/A
ENST00000547470 N/A N/A N/A N/A N/A N/A N/A N/A 0.353±0.00 N/A N/A N/A N/A N/A
ENST00000548048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.140±0.00
ENST00000548789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548883 N/A 0.261±0.00 N/A 0.024±0.00 N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A 0.053±0.00 2.529±0.00
ENST00000549927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550497 0.108±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.071±0.00 0.111±0.00 N/A
ENST00000550650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.082±0.00 N/A 2.992±0.00
ENST00000552977 N/A N/A N/A N/A N/A N/A N/A N/A 0.699±0.00 N/A N/A 0.199±0.00 0.075±0.00 N/A
ENSG00000257415 ENST00000551967 N/A N/A N/A 0.057±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257703 ENST00000548415 N/A 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.00
ENST00000548594 N/A N/A N/A 0.116±0.05 N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 0.070±0.01
ENSG00000257860 ENST00000547418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.022±0.00
ENST00000549568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550664 0.030±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.322±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020051 ENSMUST00000020241 0.063±0.00 0.120±0.08 N/A 0.006±0.00 0.569±0.46 0.161±0.07 0.071±0.04 328.204±52.03 163.433±136.14 0.072±0.04 0.119±0.00 0.212±0.12 0.018±0.00 0.017±0.00
ENSMUST00000133293 0.203±0.00 0.360±0.17 N/A N/A 0.128±0.11 N/A 0.122±0.09 N/A N/A 0.082±0.00 N/A 0.686±0.00 0.074±0.01 N/A
ENSMUST00000142088 N/A N/A N/A 0.006±0.00 N/A N/A 0.052±0.00 N/A N/A 0.092±0.01 0.060±0.00 N/A N/A 0.112±0.04
ENSMUST00000143624 N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A N/A N/A 0.482±0.00 0.040±0.00 0.102±0.00
ENSMUSG00000020052 ENSMUST00000020243 0.463±0.11 0.820±0.17 0.084±0.03 12.030±8.19 1.114±0.29 0.270±0.08 0.020±0.01 0.063±0.02 0.035±0.03 0.566±0.14 0.023±0.00 0.097±0.06 0.075±0.04 0.016±0.01
ENSMUSG00000035459 ENSMUST00000035288 0.079±0.04 0.057±0.03 0.232±0.02 0.025±0.00 1.178±0.20 0.051±0.01 N/A 0.510±0.06 3.524±1.18 0.140±0.05 0.274±0.00 0.334±0.21 1.954±0.90 0.466±0.13
ENSMUST00000099390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160580 N/A 0.188±0.08 N/A N/A N/A N/A 0.088±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161560 N/A 0.127±0.11 0.972±0.24 0.016±0.00 N/A 0.100±0.04 N/A N/A 4.267±0.73 0.294±0.00 1.761±0.34 0.360±0.11 1.301±0.48 1.926±0.00
ENSMUST00000163045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000047129 ENSMUST00000169849 0.100±0.03 0.058±0.00 0.012±0.00 N/A 0.099±0.03 N/A 0.135±0.00 N/A 0.026±0.02 N/A 0.342±0.28 N/A 0.031±0.00 24.283±10.30
ENSMUST00000189456 0.105±0.00 N/A 0.023±0.01 N/A 0.119±0.00 N/A 0.133±0.00 0.079±0.00 0.042±0.02 0.126±0.00 0.454±0.14 0.050±0.00 N/A 3.079±0.00
ENSMUST00000189775 N/A 0.087±0.00 0.035±0.00 N/A 0.122±0.01 0.151±0.00 0.119±0.00 0.061±0.02 0.124±0.00 0.056±0.01 0.558±0.00 0.127±0.05 0.016±0.00 78.102±15.63
ENSMUSG00000089656 ENSMUST00000162837 2.466±1.26 N/A N/A N/A 1.029±0.12 N/A 2.313±0.25 N/A 0.324±0.04 1.047±0.00 0.824±0.00 5.785±0.00 0.967±0.00 3.659±1.18
ENSMUSG00000089666 ENSMUST00000160532 N/A N/A N/A 0.003±0.00 0.295±0.11 N/A N/A N/A 0.248±0.19 0.195±0.00 N/A N/A 0.031±0.01 N/A

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