C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700113H08 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169849 1700113H08Rik-001 ENSMUSG00000047129 10090 + 10:87058046-87230588 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartLiverMusclePlacentaTestisENSMUST00000169849
Transcript ID Adipose Adrenal Bladder Breast Heart Liver Muscle Placenta Testis
ENSMUST00000169849 0.100±0.03 0.058±0.00 0.012±0.00 0.099±0.03 0.135±0.00 0.026±0.02 0.342±0.28 0.031±0.00 24.283±10.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WM CIL_0007WM_0002 VISTA 10:86992836-87593886
CIL_00083Z CIL_00083Z_0002 VISTA 10:87024267-87626929

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378113 C12orf42-201 protein_coding Homo_sapiens 0 305
ENST00000548048 C12orf42-003 protein_coding Homo_sapiens 0 305
ENST00000548883 C12orf42-001 protein_coding Homo_sapiens 0 305
ENST00000551134 C12orf42-002 nonsense_mediated_decay Homo_sapiens 0 305

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