C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cadherin 19, type 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047216 Cdh19 10090 - 1:110888326-110977584 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000094626 Cdh19-001 110888326-110977363 protein_coding
  ENSMUST00000187555 Cdh19-002 110950353-110977584 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094626ENSMUST00000187555
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094626 0.244±0.05 0.222±0.12 2.630±0.49 0.061±0.01 0.410±0.09 0.277±0.09 0.570±0.10 0.095±0.05 0.007±0.01 0.233±0.12 0.233±0.08 0.180±0.08 0.029±0.01 0.013±0.00
ENSMUST00000187555 N/A N/A N/A N/A 0.730±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QJ CIL_0005QJ_0002 CGP 1:109982431-110977584
CIL_0005ST CIL_0005ST_0002 CGP 1:110888326-111864918

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074991 CDH19 cadherin 19, type 2 protein_coding Danio_rerio
ENSG00000071991 CDH19 cadherin 19, type 2 protein_coding Homo_sapiens

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