C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005ST_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000071991-ENSG00000171451 CGP 9606 18:66501083-67516980
GeneTranscriptPositionBiotype
ENSG00000071991 (CDH19)
cadherin 19, type 2
ENST00000262150 (CDH19-001) 66501083-66604134 protein_coding
ENST00000454642 (CDH19-003) 66532339-66572171 protein_coding
ENST00000540086 (CDH19-005) 66505045-66604088 protein_coding
ENST00000579658 (CDH19-002) 66504812-66604138 nonsense_mediated_decay
ENST00000580157 (CDH19-006) 66572010-66604088 protein_coding
ENSG00000171451 (DSEL)
dermatan sulfate epimerase-like
ENST00000310045 (DSEL-001) 67506582-67516980 protein_coding
ENSG00000260578 (CTD-2541J13.1)
ENST00000562669 (CTD-2541J13.1-001) 67481791-67484966 lincRNA
ENSG00000263424 (CTD-2541J13.2)
ENST00000581951 (CTD-2541J13.2-002) 67506589-67511296 antisense
ENST00000583493 (CTD-2541J13.2-001) 67506589-67514030 antisense
ENSG00000265936 (RP11-563H6.1)
ENST00000579213 (RP11-563H6.1-001) 67375133-67375305 processed_pseudogene
CIL_0005ST_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047216-ENSMUSG00000038702 CGP 10090 1:110888326-111864918
GeneTranscriptPositionBiotype
ENSMUSG00000038702 (Dsel)
dermatan sulfate epimerase-like
ENSMUST00000035462 (Dsel-001) 111858706-111864918 protein_coding
ENSMUST00000186365 (Dsel-002) 111858702-111864768 processed_transcript
ENSMUST00000189370 (Dsel-003) 111864095-111864880 processed_transcript
ENSMUST00000189731 (Dsel-004) 111863323-111864883 processed_transcript
ENSMUSG00000047216 (Cdh19)
cadherin 19, type 2
ENSMUST00000094626 (Cdh19-001) 110888326-110977363 protein_coding
ENSMUST00000187555 (Cdh19-002) 110950353-110977584 processed_transcript
ENSMUSG00000100555 (RP23-192E10.1)
predicted gene 8173
ENSMUST00000186797 (RP23-192E10.1-001) 111804934-111807775 processed_pseudogene
ENSMUSG00000101846 (RP24-480B20.1)
predicted gene, 19927
ENSMUST00000185792 (RP24-480B20.1-001) 111385918-111386698 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ST_0001ENSG00000071991ENST00000262150ENST00000454642ENST00000540086ENST00000579658ENST00000580157ENSG00000171451ENST00000310045ENSG00000260578ENST00000562669ENSG00000263424ENST00000581951ENST00000583493ENSG00000265936ENST00000579213CIL_0005ST_0002ENSMUSG00000038702ENSMUST00000035462ENSMUST00000186365ENSMUST00000189370ENSMUST00000189731ENSMUSG00000047216ENSMUST00000094626ENSMUST00000187555ENSMUSG00000100555ENSMUST00000186797ENSMUSG00000101846ENSMUST00000185792
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ST_0001ENSG00000071991ENST00000262150ENST00000454642ENST00000540086ENST00000579658ENSG00000171451ENST00000310045ENSG00000260578ENST00000562669ENSG00000263424ENST00000581951ENST00000583493ENSG00000265936ENST00000579213CIL_0005ST_0002ENSMUSG00000038702ENSMUST00000035462ENSMUST00000186365ENSMUST00000189370ENSMUST00000189731ENSMUSG00000047216ENSMUST00000094626ENSMUST00000187555ENSMUSG00000100555ENSMUST00000186797ENSMUSG00000101846ENSMUST00000185792
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000071991 ENST00000262150 0.578±0.00 0.261±0.00 0.019±0.00 N/A N/A 1.773±1.14 2.372±0.83 0.324±0.00 0.496±0.00 0.674±0.00 N/A 0.005±0.00 0.113±0.04 0.776±0.00
ENST00000454642 N/A N/A 0.091±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540086 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.430±0.00 0.145±0.00 N/A N/A N/A
ENST00000579658 1.096±0.00 0.265±0.00 N/A 2.887±0.00 0.901±0.00 3.040±0.84 3.271±0.14 N/A 2.132±0.00 0.391±0.10 0.056±0.00 0.086±0.08 0.384±0.06 0.294±0.00
ENST00000580157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171451 ENST00000310045 1.351±0.00 0.585±0.00 0.998±0.00 1.461±0.31 1.659±0.82 0.950±0.16 0.320±0.03 0.624±0.15 1.004±0.17 0.651±0.00 0.134±0.03 0.674±0.36 0.884±0.17 0.886±0.44
ENSG00000260578 ENST00000562669 0.202±0.00 0.077±0.00 0.203±0.00 0.168±0.03 0.255±0.24 0.062±0.01 0.048±0.02 0.061±0.00 0.170±0.13 0.100±0.01 0.029±0.00 0.104±0.06 0.033±0.01 0.046±0.02
ENSG00000263424 ENST00000581951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.958±0.00 N/A N/A N/A
ENST00000583493 N/A 0.417±0.00 2.819±0.00 3.723±0.36 1.670±0.33 1.379±0.00 0.265±0.11 0.887±0.17 1.824±1.38 2.053±1.04 0.099±0.02 1.258±0.86 1.258±0.00 0.605±0.00
ENSG00000265936 ENST00000579213 N/A N/A N/A 0.106±0.00 N/A N/A N/A 0.106±0.00 N/A N/A N/A 0.421±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038702 ENSMUST00000035462 0.435±0.20 0.704±0.27 2.326±0.00 1.061±0.52 2.252±1.00 0.541±0.14 0.141±0.00 0.371±0.19 0.077±0.04 1.310±0.62 0.084±0.00 2.447±1.51 0.852±0.37 0.276±0.06
ENSMUST00000186365 N/A N/A 0.739±0.00 0.788±0.00 N/A N/A N/A N/A N/A N/A 0.165±0.06 N/A 0.223±0.06 0.067±0.00
ENSMUST00000189370 N/A 3.041±1.06 N/A N/A 3.939±0.78 0.766±0.15 N/A 0.515±0.22 0.125±0.05 1.588±0.11 N/A 4.082±1.15 N/A N/A
ENSMUST00000189731 N/A 2.523±0.88 N/A N/A N/A N/A N/A N/A 0.188±0.00 N/A N/A 2.018±0.42 N/A N/A
ENSMUSG00000047216 ENSMUST00000094626 0.244±0.05 0.222±0.12 2.630±0.49 0.061±0.01 0.410±0.09 0.277±0.09 0.570±0.10 0.095±0.05 0.007±0.01 0.233±0.12 0.233±0.08 0.180±0.08 0.029±0.01 0.013±0.00
ENSMUST00000187555 N/A N/A N/A N/A 0.730±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000100555 ENSMUST00000186797 0.030±0.02 N/A 0.037±0.03 0.222±0.23 0.022±0.00 N/A N/A 0.036±0.01 0.009±0.01 0.036±0.00 0.024±0.00 0.119±0.11 0.024±0.02 0.013±0.00
ENSMUSG00000101846 ENSMUST00000185792 N/A N/A N/A 0.108±0.10 N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A

Loading