C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005QJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000081138-ENSG00000071991 CGP 9606 18:65750252-66604138
GeneTranscriptPositionBiotype
ENSG00000071991 (CDH19)
cadherin 19, type 2 		ENST00000262150 (CDH19-001) 66501083-66604134 protein_coding
ENST00000454642 (CDH19-003) 66532339-66572171 protein_coding
ENST00000540086 (CDH19-005) 66505045-66604088 protein_coding
ENST00000579658 (CDH19-002) 66504812-66604138 nonsense_mediated_decay
ENST00000580157 (CDH19-006) 66572010-66604088 protein_coding
ENSG00000081138 (CDH7)
cadherin 7, type 2 		ENST00000323011 (CDH7-002) 65750252-65880939 protein_coding
ENST00000397968 (CDH7-001) 65750921-65890341 protein_coding
ENST00000536984 (CDH7-003) 65750653-65864125 protein_coding
ENST00000581601 (CDH7-004) 65763008-65803810 processed_transcript
ENSG00000263622 (RP11-389J22.3)
 ENST00000578673 (RP11-389J22.3-001) 65917782-65920942 lincRNA
ENSG00000263720 (RP11-389J22.1)
 ENST00000581987 (RP11-389J22.1-001) 65865262-65866397 sense_intronic
ENSG00000264685 (PRPF19P1)
PRPF19 pseudogene 1 		ENST00000584766 (PRPF19P1-001) 66068750-66069647 processed_pseudogene
CIL_0005QJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026312-ENSMUSG00000047216 CGP 10090 1:109982431-110977584
GeneTranscriptPositionBiotype
ENSMUSG00000026312 (Cdh7)
cadherin 7, type 2 		ENSMUST00000027542 (Cdh7-201) 109993982-110139189 protein_coding
ENSMUST00000112701 (Cdh7-001) 109982710-110140157 protein_coding
ENSMUST00000129923 (Cdh7-003) 109982981-109995323 protein_coding
ENSMUST00000131464 (Cdh7-005) 109983229-110139195 nonsense_mediated_decay
ENSMUST00000134301 (Cdh7-007) 110099295-110138058 protein_coding
ENSMUST00000137092 (Cdh7-002) 109982431-109995955 protein_coding
ENSMUST00000145188 (Cdh7-006) 109983006-109994382 protein_coding
ENSMUST00000146282 (Cdh7-004) 109983281-109998669 protein_coding
ENSMUST00000172005 (Cdh7-202) 109983737-110139001 protein_coding
ENSMUSG00000047216 (Cdh19)
cadherin 19, type 2 		ENSMUST00000094626 (Cdh19-001) 110888326-110977363 protein_coding
ENSMUST00000187555 (Cdh19-002) 110950353-110977584 processed_transcript
ENSMUSG00000099926 (RP24-95N15.2)
predicted gene 6693 		ENSMUST00000189583 (RP24-95N15.2-001) 110600021-110600833 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005QJ_0001ENSG00000071991ENST00000262150ENST00000454642ENST00000540086ENST00000579658ENST00000580157ENSG00000081138ENST00000323011ENST00000397968ENST00000536984ENST00000581601ENSG00000263622ENST00000578673ENSG00000263720ENST00000581987ENSG00000264685ENST00000584766CIL_0005QJ_0002ENSMUSG00000026312ENSMUST00000027542ENSMUST00000112701ENSMUST00000129923ENSMUST00000131464ENSMUST00000134301ENSMUST00000137092ENSMUST00000145188ENSMUST00000146282ENSMUST00000172005ENSMUSG00000047216ENSMUST00000094626ENSMUST00000187555ENSMUSG00000099926ENSMUST00000189583
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005QJ_0001ENSG00000071991ENST00000262150ENST00000454642ENST00000540086ENST00000579658ENSG00000081138ENST00000323011ENST00000397968ENST00000536984ENSG00000263622ENST00000578673ENSG00000263720ENST00000581987ENSG00000264685ENST00000584766CIL_0005QJ_0002ENSMUSG00000026312ENSMUST00000027542ENSMUST00000112701ENSMUST00000129923ENSMUST00000131464ENSMUST00000137092ENSMUST00000146282ENSMUST00000172005ENSMUSG00000047216ENSMUST00000094626ENSMUST00000187555ENSMUSG00000099926ENSMUST00000189583
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000071991 ENST00000262150 0.578±0.00 0.261±0.00 0.019±0.00 N/A N/A 1.773±1.14 2.372±0.83 0.324±0.00 0.496±0.00 0.674±0.00 N/A 0.005±0.00 0.113±0.04 0.776±0.00
ENST00000454642 N/A N/A 0.091±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540086 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.430±0.00 0.145±0.00 N/A N/A N/A
ENST00000579658 1.096±0.00 0.265±0.00 N/A 2.887±0.00 0.901±0.00 3.040±0.84 3.271±0.14 N/A 2.132±0.00 0.391±0.10 0.056±0.00 0.086±0.08 0.384±0.06 0.294±0.00
ENST00000580157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000081138 ENST00000323011 N/A N/A N/A 0.744±0.17 0.014±0.00 N/A N/A N/A N/A 0.013±0.00 N/A 0.025±0.01 0.054±0.00 0.244±0.08
ENST00000397968 0.010±0.00 0.009±0.00 0.004±0.00 0.313±0.01 0.005±0.00 0.008±0.00 0.004±0.00 0.005±0.00 0.004±0.00 0.006±0.00 0.001±0.00 0.004±0.00 0.007±0.00 0.044±0.00
ENST00000536984 0.014±0.00 0.109±0.00 N/A N/A 0.041±0.00 0.011±0.00 0.019±0.00 0.037±0.00 0.012±0.00 0.046±0.00 0.006±0.00 0.011±0.00 N/A 0.057±0.00
ENST00000581601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000263622 ENST00000578673 N/A N/A N/A N/A N/A N/A 0.517±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000263720 ENST00000581987 N/A N/A N/A 0.074±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000264685 ENST00000584766 N/A 0.016±0.00 N/A N/A N/A N/A 0.172±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026312 ENSMUST00000027542 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A 0.004±0.00 N/A N/A N/A N/A N/A
ENSMUST00000112701 N/A N/A N/A 0.617±0.00 N/A N/A N/A N/A N/A N/A N/A 0.085±0.01 0.002±0.00 N/A
ENSMUST00000129923 N/A N/A N/A N/A N/A N/A N/A N/A 0.012±0.00 N/A N/A 0.008±0.00 N/A 0.009±0.00
ENSMUST00000131464 N/A N/A N/A 0.539±0.00 N/A 0.048±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137092 N/A N/A N/A N/A N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A
ENSMUST00000145188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146282 0.017±0.00 N/A N/A 0.627±0.03 N/A N/A N/A N/A 0.006±0.00 N/A N/A 0.003±0.00 0.004±0.00 N/A
ENSMUST00000172005 N/A N/A N/A 1.833±0.00 N/A N/A N/A N/A 0.006±0.00 N/A N/A 0.007±0.00 N/A N/A
ENSMUSG00000047216 ENSMUST00000094626 0.244±0.05 0.222±0.12 2.630±0.49 0.061±0.01 0.410±0.09 0.277±0.09 0.570±0.10 0.095±0.05 0.007±0.01 0.233±0.12 0.233±0.08 0.180±0.08 0.029±0.01 0.013±0.00
ENSMUST00000187555 N/A N/A N/A N/A 0.730±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000099926 ENSMUST00000189583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.007±0.00 N/A

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