C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histone cluster 1, H2be
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047246 Hist1h2be 10090 - 13:23583742-23621124 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000051091 Hist1h2be-001 23583743-23621124 protein_coding
  ENSMUST00000091704 Hist1h2be-002 23583742-23621094 protein_coding
  ENSMUST00000129312 Hist1h2be-003 23618980-23621078 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000051091ENSMUST00000091704ENSMUST00000129312
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000051091 1.769±0.39 N/A 0.589±0.09 0.851±0.37 0.364±0.00 1.905±0.49 0.437±0.06 0.371±0.07 1.561±1.26 1.639±0.00 0.506±0.11 1.281±0.97 0.410±0.41 0.324±0.32
ENSMUST00000091704 1.092±0.37 1.794±0.50 0.170±0.00 1.601±0.24 2.124±0.55 3.284±1.32 0.653±0.00 0.326±0.20 0.750±0.66 1.053±0.50 0.553±0.00 3.037±2.32 0.887±0.73 0.539±0.33
ENSMUST00000129312 1.818±0.98 0.238±0.00 0.614±0.05 0.556±0.29 0.980±0.23 0.881±0.08 1.054±0.18 0.348±0.10 0.672±0.54 0.741±0.11 1.864±0.69 0.433±0.15 0.230±0.06 0.050±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LM CIL_0000LM_0004 CGP 13:23583742-23622502

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0002227 IEA innate immune response in mucosa
GO:0003677 IEA DNA binding
GO:0005615 IEA extracellular space
GO:0005654 TAS nucleoplasm
GO:0019731 IEA antibacterial humoral response
GO:0046982 IEA protein heterodimerization activity
GO:0050830 IEA defense response to Gram-positive bacterium
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034203 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000051726 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000051778 zgc:194989 zgc:194989 protein_coding Danio_rerio
ENSDARG00000068996 hist2h2l histone 2, H2, like protein_coding Danio_rerio
ENSDARG00000070289 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000076129 CABZ01086354.1 Histone H2B protein_coding Danio_rerio
ENSDARG00000078724 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000078941 ano9a anoctamin 9a protein_coding Danio_rerio
ENSDARG00000086591 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000087854 ano9a anoctamin 9a protein_coding Danio_rerio
ENSDARG00000088028 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000092743 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000093195 si:dkey-261m9.6 si:dkey-261m9.6 protein_coding Danio_rerio
ENSDARG00000093756 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000094610 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000094744 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSG00000180596 HIST1H2BC histone cluster 1, H2bc protein_coding Homo_sapiens

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