C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gap junction protein, beta 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047797 Gjb1 10090 + X:101376378-101385629 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000052130 Gjb1-001 101377273-101385629 protein_coding
  ENSMUST00000119080 Gjb1-003 101376378-101385629 protein_coding
  ENSMUST00000119190 Gjb1-002 101383736-101385629 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052130ENSMUST00000119080ENSMUST00000119190
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052130 0.629±0.02 0.296±0.11 N/A N/A 1.557±0.92 33.509±2.58 N/A 46.585±3.79 330.984±250.34 2.472±0.24 N/A 1.495±0.69 12.649±14.73 0.369±0.00
ENSMUST00000119080 0.017±0.00 0.154±0.10 0.051±0.02 N/A 0.210±0.00 5.252±0.75 0.101±0.06 N/A N/A N/A 0.245±0.10 1.664±0.19 0.996±0.52 0.135±0.10
ENSMUST00000119190 N/A N/A N/A 1.128±1.43 0.518±0.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057N CIL_00057N_0002 CGP X:101299168-101385629
CIL_00057Q CIL_00057Q_0002 CGP X:101376378-101420849

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005921 IDA gap junction
GO:0005922 IEA connexon complex
GO:0007154 IEA cell communication
GO:0016021 IEA integral component of membrane
GO:0042803 IDA protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035553 cx27.5 connexin 27.5 protein_coding Danio_rerio
ENSDARG00000058064 cx31.7 connexin 31.7 protein_coding Danio_rerio
ENSG00000169562 GJB1 gap junction protein, beta 1, 32kDa protein_coding Homo_sapiens

Loading