C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00057N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196338-ENSG00000169562 CGP 9606 X:71144831-71225516
GeneTranscriptPositionBiotype
ENSG00000169562 (GJB1)
gap junction protein, beta 1, 32kDa
ENST00000361726 (GJB1-002) 71223206-71225198 protein_coding
ENST00000374022 (GJB1-001) 71215212-71225516 protein_coding
ENST00000374029 (GJB1-003) 71215194-71225200 protein_coding
ENST00000447581 (GJB1-004) 71215259-71223960 protein_coding
ENSG00000196338 (NLGN3)
neuroligin 3
ENST00000358741 (NLGN3-002) 71144862-71170293 protein_coding
ENST00000374051 (NLGN3-001) 71144843-71171201 protein_coding
ENST00000395855 (NLGN3-003) 71144843-71167757 protein_coding
ENST00000476589 (NLGN3-004) 71153456-71171199 processed_transcript
ENST00000536169 (NLGN3-201) 71144831-71171199 protein_coding
ENST00000612180 (NLGN3-202) 71144831-71171199 protein_coding
ENSG00000228427 (RP5-1091N2.9)
ENST00000450860 (RP5-1091N2.9-001) 71183559-71198175 antisense
CIL_00057N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031302-ENSMUSG00000047797 CGP 10090 X:101299168-101385629
GeneTranscriptPositionBiotype
ENSMUSG00000031302 (Nlgn3)
neuroligin 3
ENSMUST00000065858 (Nlgn3-001) 101299210-101325963 protein_coding
ENSMUST00000118111 (Nlgn3-002) 101299168-101325963 protein_coding
ENSMUST00000130555 (Nlgn3-003) 101299175-101318675 protein_coding
ENSMUST00000144860 (Nlgn3-007) 101314391-101318151 processed_transcript
ENSMUST00000147443 (Nlgn3-006) 101300474-101302054 processed_transcript
ENSMUST00000151528 (Nlgn3-004) 101299194-101325963 protein_coding
ENSMUSG00000047797 (Gjb1)
gap junction protein, beta 1
ENSMUST00000052130 (Gjb1-001) 101377273-101385629 protein_coding
ENSMUST00000119080 (Gjb1-003) 101376378-101385629 protein_coding
ENSMUST00000119190 (Gjb1-002) 101383736-101385629 protein_coding
ENSMUSG00000096056 (Gm21986)
predicted gene 21986
ENSMUST00000113671 (Gm21986-001) 101295839-101321348 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00057N_0001ENSG00000169562ENST00000361726ENST00000374022ENST00000374029ENST00000447581ENSG00000196338ENST00000358741ENST00000374051ENST00000395855ENST00000476589ENST00000536169ENST00000612180ENSG00000228427ENST00000450860CIL_00057N_0002ENSMUSG00000031302ENSMUST00000065858ENSMUST00000118111ENSMUST00000130555ENSMUST00000144860ENSMUST00000147443ENSMUST00000151528ENSMUSG00000047797ENSMUST00000052130ENSMUST00000119080ENSMUST00000119190ENSMUSG00000096056ENSMUST00000113671
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00057N_0001ENSG00000169562ENST00000361726ENST00000374022ENST00000374029ENSG00000196338ENST00000358741ENST00000374051ENST00000395855ENST00000476589ENST00000536169ENST00000612180ENSG00000228427ENST00000450860CIL_00057N_0002ENSMUSG00000031302ENSMUST00000065858ENSMUST00000118111ENSMUSG00000047797ENSMUST00000052130ENSMUST00000119080ENSMUST00000119190ENSMUSG00000096056ENSMUST00000113671
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169562 ENST00000361726 0.171±0.00 0.003±0.00 N/A 16.536±14.48 N/A N/A N/A N/A 15.317±0.00 N/A 0.006±0.00 2.359±0.00 N/A 3.234±0.89
ENST00000374022 N/A N/A 0.724±0.00 0.972±0.00 0.127±0.01 0.713±0.00 N/A 11.700±0.00 N/A 0.096±0.00 N/A 2.208±0.41 N/A N/A
ENST00000374029 N/A 0.011±0.00 2.871±0.00 N/A 0.671±0.14 3.479±1.81 N/A 22.544±3.65 94.745±0.00 0.435±0.00 0.070±0.03 4.356±3.52 0.064±0.02 N/A
ENST00000447581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000196338 ENST00000358741 0.100±0.00 0.328±0.00 0.165±0.00 N/A N/A N/A 0.251±0.00 0.091±0.00 N/A 0.108±0.00 0.180±0.00 N/A N/A N/A
ENST00000374051 N/A N/A N/A 7.193±0.00 N/A N/A N/A N/A 0.077±0.00 N/A N/A 2.606±1.96 0.198±0.10 N/A
ENST00000395855 0.108±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476589 N/A 0.439±0.00 0.256±0.00 5.448±3.84 0.197±0.03 N/A 0.053±0.00 0.202±0.00 0.299±0.00 0.057±0.00 0.163±0.08 0.999±0.54 0.137±0.08 3.292±0.00
ENST00000536169 0.172±0.00 N/A N/A 4.205±2.88 0.233±0.13 N/A N/A 0.172±0.00 0.019±0.00 N/A N/A 1.639±1.28 0.268±0.08 1.229±0.00
ENST00000612180 N/A N/A N/A 5.178±0.00 N/A 1.466±0.00 N/A N/A 0.068±0.00 N/A N/A 0.765±0.00 0.226±0.13 3.176±2.55
ENSG00000228427 ENST00000450860 0.256±0.00 0.858±0.00 N/A 0.191±0.11 0.566±0.40 0.174±0.02 0.278±0.09 0.514±0.00 0.073±0.00 0.199±0.16 0.197±0.00 0.288±0.06 0.405±0.26 0.223±0.15
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031302 ENSMUST00000065858 N/A N/A N/A 8.842±5.30 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000118111 N/A N/A N/A 5.219±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000047797 ENSMUST00000052130 0.629±0.02 0.296±0.11 N/A N/A 1.557±0.92 33.509±2.58 N/A 46.585±3.79 330.984±250.34 2.472±0.24 N/A 1.495±0.69 12.649±14.73 0.369±0.00
ENSMUST00000119080 0.017±0.00 0.154±0.10 0.051±0.02 N/A 0.210±0.00 5.252±0.75 0.101±0.06 N/A N/A N/A 0.245±0.10 1.664±0.19 0.996±0.52 0.135±0.10
ENSMUST00000119190 N/A N/A N/A 1.128±1.43 0.518±0.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000096056 ENSMUST00000113671 N/A 8.082±0.80 N/A 6.683±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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