C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gap junction protein, beta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052130 Gjb1-001 ENSMUSG00000047797 10090 + X:101377273-101385629 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000052130
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000052130 0.629±0.02 0.296±0.11 1.557±0.92 33.509±2.58 46.585±3.79 330.984±250.34 2.472±0.24 1.495±0.69 12.649±14.73 0.369±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057N CIL_00057N_0002 CGP X:101299168-101385629
CIL_00057Q CIL_00057Q_0002 CGP X:101376378-101420849

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005921 IDA gap junction
GO:0005922 IEA connexon complex
GO:0007154 IEA cell communication
GO:0016021 IEA integral component of membrane
GO:0042803 IDA protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361726 GJB1-002 protein_coding Homo_sapiens 0 1437
ENST00000374022 GJB1-001 protein_coding Homo_sapiens 0 1526
ENST00000374029 GJB1-003 protein_coding Homo_sapiens 0 1441
ENST00000447581 GJB1-004 protein_coding Homo_sapiens 0 359

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