C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gap junction protein, beta 1, 32kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169562 GJB1 9606 + X:71215194-71225516 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000361726 GJB1-002 71223206-71225198 protein_coding
  ENST00000374022 GJB1-001 71215212-71225516 protein_coding
  ENST00000374029 GJB1-003 71215194-71225200 protein_coding
  ENST00000447581 GJB1-004 71215259-71223960 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361726ENST00000374022ENST00000374029
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361726 0.171±0.00 0.003±0.00 N/A 16.536±14.48 N/A N/A N/A 15.317±0.00 N/A 0.006±0.00 2.359±0.00 N/A 3.234±0.89
ENST00000374022 N/A N/A 0.724±0.00 0.972±0.00 0.127±0.01 0.713±0.00 11.700±0.00 N/A 0.096±0.00 N/A 2.208±0.41 N/A N/A
ENST00000374029 N/A 0.011±0.00 2.871±0.00 N/A 0.671±0.14 3.479±1.81 22.544±3.65 94.745±0.00 0.435±0.00 0.070±0.03 4.356±3.52 0.064±0.02 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057N CIL_00057N_0001 CGP X:71144831-71225516
CIL_00057Q CIL_00057Q_0001 CGP X:71215194-71255146

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005886 IEA plasma membrane
GO:0005921 IEA gap junction
GO:0005922 IEA connexon complex
GO:0006810 TAS transport
GO:0007154 IEA cell communication
GO:0007267 TAS cell-cell signaling
GO:0007399 TAS nervous system development
GO:0008219 IEA cell death
GO:0016021 IEA integral component of membrane
GO:0016264 TAS gap junction assembly
GO:0042803 IEA protein homodimerization activity
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035553 cx27.5 connexin 27.5 protein_coding Danio_rerio
ENSDARG00000058064 cx31.7 connexin 31.7 protein_coding Danio_rerio
ENSMUSG00000047797 Gjb1 gap junction protein, beta 1 protein_coding Mus_musculus

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