C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: INO80 complex subunit C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047989 Ino80c 10090 - 18:24104757-24121953 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000055012 Ino80c-004 24106374-24121835 protein_coding
  ENSMUST00000125169 Ino80c-003 24106378-24114913 protein_coding
  ENSMUST00000141489 Ino80c-002 24104757-24121953 protein_coding
  ENSMUST00000153360 Ino80c-001 24104757-24121953 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000125169ENSMUST00000141489ENSMUST00000153360
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000125169 N/A 2.878±0.63 N/A 4.379±0.00 3.734±0.00 2.598±0.00 N/A 2.259±0.00 N/A N/A N/A 2.942±1.07 N/A 11.045±1.11
ENSMUST00000141489 N/A N/A N/A N/A N/A N/A N/A N/A 1.360±0.00 N/A N/A N/A N/A N/A
ENSMUST00000153360 9.195±1.94 3.901±0.37 5.281±0.39 6.141±0.28 6.913±1.35 3.754±0.53 4.711±1.02 6.120±0.49 6.298±4.04 7.556±0.75 12.821±0.36 4.733±1.65 13.164±4.15 11.207±3.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FM CIL_0002FM_0003 CGP 18:24104757-24286818

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0006338 IEA chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0031011 IEA Ino80 complex
GO:0071339 ISS MLL1 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055719 ino80c INO80 complex subunit C protein_coding Danio_rerio
ENSG00000267140 RP11-322E11.6 Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000467041} protein_coding Homo_sapiens

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