C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: INO80 complex subunit C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125169 Ino80c-003 ENSMUSG00000047989 10090 - 18:24106378-24114913 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyOvaryTestisENSMUST00000125169
Transcript ID Adrenal Brain Breast Colon Kidney Ovary Testis
ENSMUST00000125169 2.878±0.63 4.379±0.00 3.734±0.00 2.598±0.00 2.259±0.00 2.942±1.07 11.045±1.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FM CIL_0002FM_0003 CGP 18:24104757-24286818

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006338 IEA chromatin remodeling
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0031011 IEA Ino80 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000283410 INO80C-004 retained_intron Homo_sapiens 0 300
ENST00000334598 INO80C-001 protein_coding Homo_sapiens 0 643
ENST00000441607 INO80C-002 protein_coding Homo_sapiens 0 640
ENST00000586449 INO80C-007 nonsense_mediated_decay Homo_sapiens 0 230
ENST00000586489 INO80C-009 protein_coding Homo_sapiens 0 571
ENST00000591139 INO80C-011 protein_coding Homo_sapiens 0 442
ENST00000592173 INO80C-003 protein_coding Homo_sapiens 0 399

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