C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002FM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000055719-ENSDARG00000061335 CGP 7955 16:29101265-29351259
GeneTranscriptPositionBiotype
ENSDARG00000055719 (ino80c)
INO80 complex subunit C 		ENSDART00000078119 (ino80c-001) 29101265-29106729 protein_coding
ENSDARG00000061335 (galnt1)
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 		ENSDART00000087368 (galnt1-201) 29225383-29351259 protein_coding
ENSDART00000140673 (galnt1-001) 29114198-29351259 protein_coding
CIL_0002FM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000153391-ENSG00000141429 CGP 9606 18:35452230-35711834
GeneTranscriptPositionBiotype
ENSG00000141429 (GALNT1)
polypeptide N-acetylgalactosaminyltransferase 1 		ENST00000269195 (GALNT1-001) 35654560-35711834 protein_coding
ENST00000586725 (GALNT1-005) 35581117-35654593 processed_transcript
ENST00000589189 (GALNT1-004) 35627429-35710292 nonsense_mediated_decay
ENST00000590654 (GALNT1-003) 35654656-35709780 nonsense_mediated_decay
ENST00000591081 (GALNT1-002) 35654572-35664517 protein_coding
ENST00000591924 (GALNT1-006) 35581740-35663804 protein_coding
ENSG00000153391 (INO80C)
INO80 complex subunit C 		ENST00000283410 (INO80C-004) 35478995-35497979 retained_intron
ENST00000334598 (INO80C-001) 35468333-35497991 protein_coding
ENST00000441607 (INO80C-002) 35468463-35497943 protein_coding
ENST00000585971 (INO80C-014) 35489078-35497960 retained_intron
ENST00000586449 (INO80C-007) 35479331-35497935 nonsense_mediated_decay
ENST00000586489 (INO80C-009) 35468584-35497649 protein_coding
ENST00000587450 (INO80C-005) 35468671-35497960 protein_coding
ENST00000589053 (INO80C-006) 35497509-35497942 retained_intron
ENST00000589273 (INO80C-010) 35480467-35497599 protein_coding
ENST00000590757 (INO80C-008) 35468334-35497904 protein_coding
ENST00000591139 (INO80C-011) 35468711-35487470 protein_coding
ENST00000592173 (INO80C-003) 35452230-35497933 protein_coding
ENSG00000266965 (RP11-712P20.2)
 ENST00000593078 (RP11-712P20.2-001) 35595901-35597599 sense_intronic
ENSG00000267583 (RP11-322E11.5)
 ENST00000586741 (RP11-322E11.5-001) 35446908-35467088 lincRNA
ENST00000591141 (RP11-322E11.5-002) 35445743-35467081 lincRNA
ENST00000593122 (RP11-322E11.5-003) 35443869-35466752 lincRNA
ENSG00000279074 (RP11-322E11.3)
 ENST00000622938 (RP11-322E11.3-001) 35483431-35483667 TEC
CIL_0002FM_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047989-ENSMUSG00000000420 CGP 10090 18:24104757-24286818
GeneTranscriptPositionBiotype
ENSMUSG00000000420 (Galnt1)
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 		ENSMUST00000000430 (Galnt1-001) 24205344-24286818 protein_coding
ENSMUST00000164066 (Galnt1-007) 24246086-24271669 nonsense_mediated_decay
ENSMUST00000164998 (Galnt1-003) 24205959-24254630 protein_coding
ENSMUST00000169474 (Galnt1-005) 24279995-24282871 processed_transcript
ENSMUST00000170191 (Galnt1-004) 24280033-24283191 processed_transcript
ENSMUST00000170243 (Galnt1-002) 24205767-24286810 protein_coding
ENSMUST00000171583 (Galnt1-006) 24238323-24267667 nonsense_mediated_decay
ENSMUST00000178605 (Galnt1-201) 24232597-24286810 protein_coding
ENSMUSG00000091363 (Gm7701)
predicted gene 7701 		ENSMUST00000163185 (Gm7701-001) 24257378-24258856 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002FM_0001ENSDARG00000055719ENSDART00000078119ENSDARG00000061335ENSDART00000087368ENSDART00000140673CIL_0002FM_0002ENSG00000141429ENST00000269195ENST00000586725ENST00000589189ENST00000590654ENST00000591081ENST00000591924ENSG00000153391ENST00000283410ENST00000334598ENST00000441607ENST00000585971ENST00000586449ENST00000586489ENST00000587450ENST00000589053ENST00000589273ENST00000590757ENST00000591139ENST00000592173ENSG00000266965ENST00000593078ENSG00000267583ENST00000586741ENST00000591141ENST00000593122ENSG00000279074ENST00000622938CIL_0002FM_0003ENSMUSG00000000420ENSMUST00000000430ENSMUST00000164066ENSMUST00000164998ENSMUST00000169474ENSMUST00000170191ENSMUST00000170243ENSMUST00000171583ENSMUST00000178605ENSMUSG00000091363ENSMUST00000163185
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002FM_0001ENSDARG00000055719ENSDART00000078119ENSDARG00000061335ENSDART00000087368ENSDART00000140673CIL_0002FM_0002ENSG00000141429ENST00000269195ENST00000589189ENST00000590654ENSG00000153391ENST00000283410ENST00000334598ENST00000441607ENST00000585971ENST00000586449ENST00000586489ENST00000590757ENST00000591139ENST00000592173ENSG00000266965ENST00000593078ENSG00000267583ENST00000586741ENST00000591141ENST00000593122ENSG00000279074ENST00000622938CIL_0002FM_0003ENSMUSG00000000420ENSMUST00000000430ENSMUST00000164066ENSMUST00000170243ENSMUST00000178605ENSMUSG00000091363ENSMUST00000163185
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000055719 ENSDART00000078119 N/A N/A N/A 7.131±1.32 N/A N/A 21.461±6.87 11.635±0.35 1.520±0.00 N/A 8.438±0.00 N/A N/A N/A
ENSDARG00000061335 ENSDART00000087368 N/A N/A N/A 6.895±2.16 N/A N/A 6.180±2.47 3.704±0.11 0.169±0.00 N/A 1.255±0.00 N/A N/A N/A
ENSDART00000140673 N/A N/A N/A 14.836±0.43 N/A N/A 6.054±2.59 4.879±0.00 0.643±0.00 N/A 3.885±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141429 ENST00000269195 1.989±0.00 14.782±0.00 N/A 4.593±0.41 10.424±4.03 10.992±0.38 2.136±0.00 5.756±0.18 7.581±0.64 8.999±0.33 3.238±0.78 8.005±1.96 11.268±4.49 7.908±3.33
ENST00000586725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589189 N/A N/A 2.278±0.00 N/A 4.690±0.00 4.255±0.00 0.750±0.00 N/A 4.320±0.00 N/A 3.175±0.00 4.864±0.00 N/A N/A
ENST00000590654 5.121±0.00 N/A 0.817±0.00 2.445±0.00 3.959±1.81 3.969±0.00 4.306±1.36 N/A N/A N/A 1.555±0.00 4.268±1.16 N/A N/A
ENST00000591081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000153391 ENST00000283410 N/A N/A N/A N/A N/A 0.781±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000334598 3.351±0.00 N/A N/A N/A 1.561±0.00 2.871±0.00 4.314±0.00 2.612±2.25 1.654±1.52 1.730±1.49 1.685±0.00 6.815±1.48 15.600±5.64 7.725±0.00
ENST00000441607 N/A N/A N/A 1.906±0.00 4.636±0.00 4.374±0.00 5.410±0.00 N/A 4.398±0.00 6.075±0.00 3.456±3.18 2.521±0.00 3.404±0.00 9.832±0.00
ENST00000585971 N/A N/A N/A 1.066±0.82 N/A N/A N/A N/A N/A N/A N/A 3.533±0.00 N/A N/A
ENST00000586449 N/A N/A N/A 2.306±0.00 N/A N/A N/A 2.089±0.00 N/A N/A N/A 0.316±0.00 N/A N/A
ENST00000586489 3.749±0.00 N/A 0.428±0.00 0.404±0.00 2.948±0.00 0.748±0.00 N/A N/A N/A 0.343±0.00 N/A 0.403±0.00 N/A 26.261±2.87
ENST00000587450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590757 N/A N/A N/A N/A N/A 1.066±0.00 N/A N/A 0.566±0.00 N/A N/A 0.570±0.00 N/A N/A
ENST00000591139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.592±0.00 N/A 9.521±0.00 53.627±0.00
ENST00000592173 0.529±0.00 4.229±0.00 0.284±0.00 0.230±0.00 0.383±0.21 0.269±0.00 0.063±0.00 0.415±0.07 N/A 0.271±0.00 N/A 0.202±0.00 N/A N/A
ENSG00000266965 ENST00000593078 N/A 0.273±0.00 0.084±0.00 0.120±0.08 0.156±0.10 0.214±0.00 0.067±0.02 0.223±0.21 0.163±0.00 0.560±0.00 N/A 0.172±0.17 0.014±0.00 0.057±0.05
ENSG00000267583 ENST00000586741 N/A N/A N/A N/A 0.284±0.00 N/A 0.529±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000591141 N/A N/A N/A N/A N/A N/A N/A N/A 0.314±0.00 N/A N/A N/A N/A N/A
ENST00000593122 N/A N/A 0.898±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279074 ENST00000622938 N/A N/A N/A N/A N/A N/A 0.277±0.00 N/A N/A N/A N/A N/A N/A 0.171±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000420 ENSMUST00000000430 3.576±0.07 8.890±3.18 N/A 0.697±0.00 5.304±2.15 N/A 2.156±0.00 N/A N/A 3.630±0.00 N/A 12.575±5.34 N/A N/A
ENSMUST00000164066 N/A N/A N/A 9.422±0.00 N/A N/A N/A N/A N/A N/A N/A 25.084±0.00 60.073±0.00 10.713±0.00
ENSMUST00000164998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170243 3.449±0.00 N/A N/A 3.241±0.00 N/A 4.096±1.89 3.274±1.36 3.740±0.62 1.264±0.08 N/A 2.648±0.40 4.226±1.00 12.016±0.00 1.470±0.40
ENSMUST00000171583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178605 16.368±0.65 7.214±3.60 18.323±0.19 9.944±6.21 20.061±2.64 10.042±3.35 11.834±1.89 17.763±1.64 18.024±9.89 17.527±2.07 16.462±2.09 14.656±8.28 20.075±8.75 4.395±0.92
ENSMUSG00000091363 ENSMUST00000163185 0.282±0.12 0.146±0.11 0.056±0.04 0.147±0.01 0.187±0.05 0.246±0.07 0.081±0.02 0.087±0.03 0.130±0.07 0.361±0.09 0.033±0.01 0.227±0.11 0.082±0.05 0.046±0.02

Loading