C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: V-set and transmembrane domain containing 2A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048834 Vstm2a 10090 + 11:16257724-16427310 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000109645 Vstm2a-002 16257724-16284186 protein_coding
  ENSMUST00000109647 Vstm2a-001 16257803-16427310 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109645ENSMUST00000109647
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109645 0.789±0.61 0.055±0.00 0.234±0.00 8.049±2.61 0.044±0.02 0.118±0.03 N/A 0.779±0.49 0.015±0.00 0.574±0.20 0.024±0.02 0.275±0.23 0.030±0.01 N/A
ENSMUST00000109647 N/A 0.058±0.00 N/A N/A 0.083±0.00 0.138±0.09 0.038±0.02 N/A 0.009±0.01 N/A 0.015±0.00 N/A 0.026±0.00 0.471±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LU CIL_0006LU_0002 CGP 11:16257724-16508484

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021909 VSTM2A (1 of 2) V-set and transmembrane domain containing 2A protein_coding Danio_rerio
ENSDARG00000088300 VSTM2A (2 of 2) V-set and transmembrane domain containing 2A protein_coding Danio_rerio
ENSG00000170419 VSTM2A V-set and transmembrane domain containing 2A protein_coding Homo_sapiens

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