C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcriptional adaptor 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048930 Tada3 10090 - 6:113366025-113377883 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032410 Tada3-001 113366025-113377883 protein_coding
  ENSMUST00000043333 Tada3-005 113366655-113377376 protein_coding
  ENSMUST00000099118 Tada3-004 113366655-113377517 protein_coding
  ENSMUST00000113106 Tada3-002 113374483-113377739 protein_coding
  ENSMUST00000113107 Tada3-003 113374386-113377739 protein_coding
  ENSMUST00000125414 Tada3-006 113366916-113371142 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032410ENSMUST00000043333ENSMUST00000099118ENSMUST00000113106ENSMUST00000113107
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032410 2.827±0.48 7.093±0.45 4.877±0.00 6.111±0.73 3.090±1.25 4.204±0.83 1.043±0.34 3.119±0.69 2.159±1.46 3.201±1.10 0.773±0.07 4.595±1.51 7.577±2.54 6.181±2.24
ENSMUST00000043333 6.021±0.73 7.660±0.83 8.690±1.89 17.700±5.42 5.136±1.83 8.084±1.36 3.462±0.37 5.366±0.87 4.399±3.44 7.851±0.12 2.154±0.81 10.121±2.44 15.348±5.30 11.153±1.38
ENSMUST00000099118 N/A N/A N/A N/A N/A N/A N/A 3.213±0.00 1.579±0.48 N/A 1.274±0.17 5.204±0.47 N/A N/A
ENSMUST00000113106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.825±0.87 N/A N/A
ENSMUST00000113107 N/A N/A N/A 4.976±0.00 1.564±0.00 N/A N/A N/A N/A N/A 0.960±0.00 3.013±0.41 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WT CIL_0002WT_0002 CGP 6:113334124-113377883
CIL_0002WP CIL_0002WP_0002 CGP 6:113366025-113390448

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001932 IMP regulation of protein phosphorylation
GO:0003713 IEA transcription coactivator activity
GO:0004402 IEA histone acetyltransferase activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005671 IDA Ada2/Gcn5/Ada3 transcription activator complex
GO:0006351 IEA transcription, DNA-templated
GO:0007067 IMP mitotic nuclear division
GO:0010628 IEA positive regulation of gene expression
GO:0016922 IEA ligand-dependent nuclear receptor binding
GO:0019904 IEA protein domain specific binding
GO:0030374 IDA ligand-dependent nuclear receptor transcription coactivator activity
GO:0030914 IDA STAGA complex
GO:0031063 IGI regulation of histone deacetylation
GO:0031647 IMP regulation of protein stability
GO:0033276 IEA transcription factor TFTC complex
GO:0043966 IEA histone H3 acetylation
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0072686 IDA mitotic spindle
GO:0090043 IGI regulation of tubulin deacetylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058220 tada3l transcriptional adaptor 3 (NGG1 homolog, yeast)-like protein_coding Danio_rerio
ENSG00000171148 TADA3 transcriptional adaptor 3 protein_coding Homo_sapiens

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