C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcriptional adaptor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043333 Tada3-005 ENSMUSG00000048930 10090 - 6:113366655-113377376 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043333
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043333 6.021±0.73 7.660±0.83 8.690±1.89 17.700±5.42 5.136±1.83 8.084±1.36 3.462±0.37 5.366±0.87 4.399±3.44 7.851±0.12 2.154±0.81 10.121±2.44 15.348±5.30 11.153±1.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WT CIL_0002WT_0002 CGP 6:113334124-113377883
CIL_0002WP CIL_0002WP_0002 CGP 6:113366025-113390448

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001932 IMP regulation of protein phosphorylation
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005671 IDA Ada2/Gcn5/Ada3 transcription activator complex
GO:0006351 IEA transcription, DNA-templated
GO:0007067 IMP mitotic nuclear division
GO:0030374 IDA ligand-dependent nuclear receptor transcription coactivator activity
GO:0030914 IDA STAGA complex
GO:0031063 IGI regulation of histone deacetylation
GO:0031647 IMP regulation of protein stability
GO:0072686 IDA mitotic spindle
GO:0090043 IGI regulation of tubulin deacetylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000081054 tada3l-001 protein_coding Danio_rerio 0 196
ENST00000301964 TADA3-001 protein_coding Homo_sapiens 0 1011
ENST00000343450 TADA3-002 protein_coding Homo_sapiens 0 752
ENST00000439043 TADA3-009 protein_coding Homo_sapiens 0 357
ENST00000440161 TADA3-004 protein_coding Homo_sapiens 0 1011
ENST00000492103 TADA3-003 retained_intron Homo_sapiens 0 1011
ENST00000492635 TADA3-008 processed_transcript Homo_sapiens 0 494

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