C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcriptional adaptor 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171148 TADA3 9606 - 3:9779860-9793011 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301964 TADA3-001 9779860-9792747 protein_coding
  ENST00000343450 TADA3-002 9783128-9792736 protein_coding
  ENST00000439043 TADA3-009 9789885-9792783 protein_coding
  ENST00000440161 TADA3-004 9780256-9793011 protein_coding
  ENST00000492103 TADA3-003 9779967-9788083 retained_intron
  ENST00000492635 TADA3-008 9789703-9792408 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000301964ENST00000440161ENST00000492635
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000301964 28.386±0.00 42.487±0.00 25.226±0.00 32.672±0.00 35.100±0.00 16.029±13.94 38.337±0.00 N/A N/A 92.121±3.27 32.713±8.74 56.794±0.00
ENST00000440161 N/A N/A 20.522±0.00 10.274±0.00 14.477±0.00 1.791±0.00 7.566±0.00 8.443±0.00 3.349±0.00 24.298±13.15 29.430±0.00 110.757±0.00
ENST00000492635 N/A N/A N/A N/A N/A N/A N/A N/A 9.789±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WL CIL_0002WL_0001 CGP 3:9731729-9788219
CIL_000243 CIL_000243_0001 CGP 3:9749944-9788219
CIL_0002WT CIL_0002WT_0001 CGP 3:9757342-9793011
CIL_0002WP CIL_0002WP_0001 CGP 3:9779860-9807726

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001932 IEA regulation of protein phosphorylation
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0003713 IDA transcription coactivator activity
GO:0004402 IDA histone acetyltransferase activity
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0005634 IDA nucleus
GO:0005671 IDA Ada2/Gcn5/Ada3 transcription activator complex
GO:0006325 TAS chromatin organization
GO:0006351 IEA transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0007067 IEA mitotic nuclear division
GO:0010628 IMP positive regulation of gene expression
GO:0016922 IPI ligand-dependent nuclear receptor binding
GO:0019904 IPI protein domain specific binding
GO:0030374 IEA ligand-dependent nuclear receptor transcription coactivator activity
GO:0030520 TAS intracellular estrogen receptor signaling pathway
GO:0030914 IDA STAGA complex
GO:0031063 IEA regulation of histone deacetylation
GO:0031647 IEA regulation of protein stability
GO:0033276 IDA transcription factor TFTC complex
GO:0043966 IDA histone H3 acetylation
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0072686 IEA mitotic spindle
GO:0090043 IEA regulation of tubulin deacetylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058220 tada3l transcriptional adaptor 3 (NGG1 homolog, yeast)-like protein_coding Danio_rerio
ENSMUSG00000048930 Tada3 transcriptional adaptor 3 protein_coding Mus_musculus

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