C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: COMM domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171845 Commd3-201 ENSMUSG00000051154 10090 + 2:18672384-18676230 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000171845
Transcript ID Bladder Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000171845 10.527±0.00 10.009±0.00 17.259±0.00 16.073±5.60 7.065±0.00 30.415±15.72 13.963±0.00 11.227±4.18 7.249±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000780 CIL_000780_0003 CGP 2:18672384-18686629

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376836 COMMD3-001 protein_coding Homo_sapiens 0 959
ENST00000444869 COMMD3-003 protein_coding Homo_sapiens 0 274
ENST00000448361 COMMD3-004 protein_coding Homo_sapiens 0 586
ENST00000456711 COMMD3-002 protein_coding Homo_sapiens 0 444
ENST00000463409 COMMD3-BMI1-006 processed_transcript Homo_sapiens 0 704
ENST00000463688 COMMD3-014 retained_intron Homo_sapiens 0 274
ENST00000468179 COMMD3-015 retained_intron Homo_sapiens 0 516
ENST00000468469 COMMD3-012 processed_transcript Homo_sapiens 0 422
ENST00000471350 COMMD3-017 protein_coding Homo_sapiens 0 296
ENST00000472610 COMMD3-009 nonsense_mediated_decay Homo_sapiens 0 398
ENST00000475460 COMMD3-BMI1-004 protein_coding Homo_sapiens 0 521
ENST00000479958 COMMD3-011 retained_intron Homo_sapiens 0 449
ENST00000483684 COMMD3-016 processed_transcript Homo_sapiens 0 442
ENST00000496071 COMMD3-010 retained_intron Homo_sapiens 0 442
ENST00000602390 COMMD3-BMI1-001 protein_coding Homo_sapiens 0 497
ENST00000602395 COMMD3-BMI1-003 retained_intron Homo_sapiens 0 254
ENST00000602574 COMMD3-018 retained_intron Homo_sapiens 0 521

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