C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene 1564
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051455 Gm1564 10090 + 11:102663716-102682237 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000100378 Gm1564-001 102665588-102682237 protein_coding
  ENSMUST00000155813 Gm1564-002 102665623-102674124 processed_transcript
  ENSMUST00000156590 Gm1564-003 102663716-102675308 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100378ENSMUST00000155813ENSMUST00000156590
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100378 0.031±0.00 0.083±0.05 N/A 0.017±0.00 0.027±0.01 0.045±0.01 0.024±0.01 0.032±0.00 0.023±0.01 0.044±0.01 0.016±0.01 0.055±0.03 0.020±0.01 7.675±0.37
ENSMUST00000155813 N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A N/A 0.060±0.00 N/A N/A 0.080±0.04 20.343±10.23
ENSMUST00000156590 N/A 0.159±0.05 0.024±0.00 0.017±0.00 N/A N/A 0.006±0.00 N/A 0.009±0.00 N/A 0.026±0.02 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0002 VISTA 11:102063033-102664797
CIL_0007ST CIL_0007ST_0002 VISTA 11:102292756-102896210
CIL_0005IY CIL_0005IY_0002 CGP 11:102604396-102682237
CIL_0003CO CIL_0003CO_0002 CGP 11:102663716-102697782

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090664 C3H17orf104 chromosome 17 open reading frame 104 protein_coding Danio_rerio
ENSG00000180336 C17orf104 chromosome 17 open reading frame 104 protein_coding Homo_sapiens

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