C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 1564
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100378 Gm1564-001 ENSMUSG00000051455 10090 + 11:102665588-102682237 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100378
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100378 0.031±0.00 0.083±0.05 0.017±0.00 0.027±0.01 0.045±0.01 0.024±0.01 0.032±0.00 0.023±0.01 0.044±0.01 0.016±0.01 0.055±0.03 0.020±0.01 7.675±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0002 VISTA 11:102063033-102664797
CIL_0007ST CIL_0007ST_0002 VISTA 11:102292756-102896210
CIL_0005IY CIL_0005IY_0002 CGP 11:102604396-102682237
CIL_0003CO CIL_0003CO_0002 CGP 11:102663716-102697782

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000409122 C17orf104-002 protein_coding Homo_sapiens 0 4721
ENST00000409464 C17orf104-001 protein_coding Homo_sapiens 0 2843
ENST00000425535 C17orf104-004 protein_coding Homo_sapiens 2e-36 156
ENST00000432494 C17orf104-005 protein_coding Homo_sapiens 0 676
ENST00000456912 C17orf104-006 protein_coding Homo_sapiens 0 702
ENST00000472403 C17orf104-003 nonsense_mediated_decay Homo_sapiens 0 652
ENST00000588687 CCDC43-005 protein_coding Homo_sapiens 0 239

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