C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glycophorin A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051839 Gypa 10090 + 8:80494045-80510785 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063359 Gypa-201 80494045-80510785 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000063359
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000063359 0.100±0.04 0.066±0.01 0.432±0.08 0.063±0.00 0.132±0.05 0.961±0.83 0.047±0.02 365.102±150.90 0.433±0.27 0.034±0.02 8.227±7.06 0.062±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YO CIL_0008YO_0002 VISTA 8:80014046-80615940
CIL_0008KM CIL_0008KM_0002 VISTA 8:80201065-80801915

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005887 IDA integral component of plasma membrane
GO:0007016 IMP cytoskeletal anchoring at plasma membrane
GO:0009897 IDA external side of plasma membrane
GO:0042802 IEA identical protein binding
GO:0042803 IDA protein homodimerization activity
GO:0047484 IMP regulation of response to osmotic stress
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000170180 GYPA glycophorin A (MNS blood group) protein_coding Homo_sapiens

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