C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mesoderm specific transcript
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051855 Mest 10090 + 6:30723547-30748455 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000115127 Mest-006 30723547-30742574 protein_coding
  ENSMUST00000124665 Mest-005 30738053-30744394 protein_coding
  ENSMUST00000128398 Mest-001 30738050-30744394 protein_coding
  ENSMUST00000130751 Mest-010 30742076-30743140 processed_transcript
  ENSMUST00000131465 Mest-008 30738055-30738878 processed_transcript
  ENSMUST00000137521 Mest-009 30740782-30743142 processed_transcript
  ENSMUST00000141130 Mest-007 30723547-30732714 processed_transcript
  ENSMUST00000147400 Mest-004 30733454-30742836 protein_coding
  ENSMUST00000149496 Mest-011 30742089-30743150 retained_intron
  ENSMUST00000151777 Mest-003 30731968-30742578 protein_coding
  ENSMUST00000157040 Mest-002 30733506-30744394 protein_coding
  ENSMUST00000163949 Mest-201 30738050-30748455 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000128398ENSMUST00000131465ENSMUST00000163949
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000128398 79.544±65.84 49.956±8.48 N/A 10.260±1.23 3.013±0.63 N/A N/A 208.312±0.00 7.521±1.63 17.574±2.39 73.811±10.59
ENSMUST00000131465 268.631±191.48 100.764±48.88 N/A 40.161±7.71 7.395±2.82 N/A N/A N/A 38.373±14.13 61.760±14.62 N/A
ENSMUST00000163949 28.145±23.36 8.412±1.39 52.067±2.06 3.685±0.50 N/A 2.964±0.24 2.105±0.32 31.191±26.63 4.084±1.47 4.142±0.63 40.245±24.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PP CIL_0008PP_0002 VISTA 6:30335908-30937352
CIL_0006OS CIL_0006OS_0002 CGP 6:30653457-30748455
CIL_000271 CIL_000271_0002 CGP 6:30723547-30896794

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005783 IDA endoplasmic reticulum
GO:0008152 IEA metabolic process
GO:0010883 IMP regulation of lipid storage
GO:0016021 IEA integral component of membrane
GO:0016787 IEA hydrolase activity
GO:0032526 IDA response to retinoic acid
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032319 mest mesoderm specific transcript protein_coding Danio_rerio
ENSG00000106484 MEST mesoderm specific transcript protein_coding Homo_sapiens

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