C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mesoderm specific transcript
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000106484 MEST 9606 + 7:130486171-130506296 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000223215 MEST-001 130492093-130506292 protein_coding
  ENST00000341441 MEST-002 130486171-130506292 protein_coding
  ENST00000378576 MEST-004 130486354-130506292 protein_coding
  ENST00000393187 MEST-201 130491329-130506296 protein_coding
  ENST00000399874 MEST-007 130486971-130498179 protein_coding
  ENST00000416162 MEST-003 130486354-130506292 protein_coding
  ENST00000421001 MEST-009 130491333-130500807 protein_coding
  ENST00000427521 MEST-006 130486336-130502720 protein_coding
  ENST00000433159 MEST-008 130487126-130498451 protein_coding
  ENST00000437637 MEST-011 130492472-130498206 protein_coding
  ENST00000437945 MEST-005 130492100-130505353 protein_coding
  ENST00000458161 MEST-012 130494530-130498477 protein_coding
  ENST00000460590 MEST-010 130492395-130495547 processed_transcript
  ENST00000462132 MEST-013 130497166-130502736 processed_transcript
  ENST00000463263 MEST-017 130498226-130505298 protein_coding
  ENST00000475188 MEST-014 130497677-130498801 retained_intron
  ENST00000488093 MEST-016 130498380-130501069 retained_intron
  ENST00000494868 MEST-015 130498225-130500042 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000223215ENST00000341441ENST00000416162ENST00000437945ENST00000494868
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000223215 11.140±0.00 17.507±0.00 N/A 25.960±20.76 5.096±1.28 2.225±0.00 5.235±2.02 2.925±0.55 7.527±5.16 N/A 13.039±0.43 213.243±122.37 7.482±0.00
ENST00000341441 N/A N/A N/A N/A N/A N/A N/A 1.988±0.00 N/A N/A 6.744±1.88 N/A N/A
ENST00000416162 N/A N/A N/A N/A N/A 0.918±0.00 2.475±0.00 N/A N/A N/A 3.822±0.00 N/A N/A
ENST00000437945 N/A N/A 2.890±0.00 N/A N/A N/A 2.592±0.00 N/A N/A 0.584±0.00 N/A N/A N/A
ENST00000494868 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.511±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PP CIL_0008PP_0001 VISTA 7:130073108-130674619
CIL_0006OS CIL_0006OS_0001 CGP 7:130393771-130506296
CIL_000271 CIL_000271_0001 CGP 7:130486171-130668748

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005783 ISS endoplasmic reticulum
GO:0007498 TAS mesoderm development
GO:0008152 IEA metabolic process
GO:0010883 IEA regulation of lipid storage
GO:0016021 IEA integral component of membrane
GO:0016787 IEA hydrolase activity
GO:0032526 IEA response to retinoic acid
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032319 mest mesoderm specific transcript protein_coding Danio_rerio
ENSMUSG00000051855 Mest mesoderm specific transcript protein_coding Mus_musculus

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