C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0006OS_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000106477-ENSG00000106484 | CGP | 9606 | 7:130393771-130506296  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000106477  (CEP41)centrosomal protein 41kDa |
ENST00000223208 (CEP41-001)
|
130393771-130441237 | protein_coding | |
|
ENST00000334451 (CEP41-008)
|
130421853-130441024 | processed_transcript | ||
|
ENST00000343969 (CEP41-016)
|
130398739-130440995 | protein_coding | ||
|
ENST00000469826 (CEP41-006)
|
130411165-130440848 | protein_coding | ||
|
ENST00000471201 (CEP41-007)
|
130404599-130441057 | nonsense_mediated_decay | ||
|
ENST00000472739 (CEP41-010)
|
130401933-130426979 | protein_coding | ||
|
ENST00000475282 (CEP41-012)
|
130402695-130417332 | protein_coding | ||
|
ENST00000477003 (CEP41-005)
|
130402669-130442433 | protein_coding | ||
|
ENST00000480206 (CEP41-015)
|
130400268-130402686 | retained_intron | ||
|
ENST00000482730 (CEP41-013)
|
130412019-130426713 | retained_intron | ||
|
ENST00000484549 (CEP41-004)
|
130398729-130441027 | nonsense_mediated_decay | ||
|
ENST00000485736 (CEP41-003)
|
130397508-130401146 | retained_intron | ||
|
ENST00000489512 (CEP41-002)
|
130419034-130441056 | protein_coding | ||
|
ENST00000492389 (CEP41-011)
|
130400780-130426730 | protein_coding | ||
|
ENST00000495702 (CEP41-009)
|
130421435-130441029 | processed_transcript | ||
|
ENST00000498527 (CEP41-014)
|
130410876-130441026 | retained_intron | ||
|
ENST00000541543 (CEP41-201)
|
130393771-130441210 | protein_coding | ||
|
ENST00000603513 (CEP41-017)
|
130398842-130401209 | retained_intron | ||
|
ENST00000616628 (CEP41-202)
|
130419034-130441210 | protein_coding | ||
|
ENSG00000106484 (MEST) mesoderm specific transcript |
ENST00000223215 (MEST-001)
|
130492093-130506292 | protein_coding | |
|
ENST00000341441 (MEST-002)
|
130486171-130506292 | protein_coding | ||
|
ENST00000378576 (MEST-004)
|
130486354-130506292 | protein_coding | ||
|
ENST00000393187 (MEST-201)
|
130491329-130506296 | protein_coding | ||
|
ENST00000399874 (MEST-007)
|
130486971-130498179 | protein_coding | ||
|
ENST00000416162 (MEST-003)
|
130486354-130506292 | protein_coding | ||
|
ENST00000421001 (MEST-009)
|
130491333-130500807 | protein_coding | ||
|
ENST00000427521 (MEST-006)
|
130486336-130502720 | protein_coding | ||
|
ENST00000433159 (MEST-008)
|
130487126-130498451 | protein_coding | ||
|
ENST00000437637 (MEST-011)
|
130492472-130498206 | protein_coding | ||
|
ENST00000437945 (MEST-005)
|
130492100-130505353 | protein_coding | ||
|
ENST00000458161 (MEST-012)
|
130494530-130498477 | protein_coding | ||
|
ENST00000460590 (MEST-010)
|
130492395-130495547 | processed_transcript | ||
|
ENST00000462132 (MEST-013)
|
130497166-130502736 | processed_transcript | ||
|
ENST00000463263 (MEST-017)
|
130498226-130505298 | protein_coding | ||
|
ENST00000475188 (MEST-014)
|
130497677-130498801 | retained_intron | ||
|
ENST00000488093 (MEST-016)
|
130498380-130501069 | retained_intron | ||
|
ENST00000494868 (MEST-015)
|
130498225-130500042 | retained_intron | ||
|
ENSG00000259920 (RP11-2E11.5) |
ENST00000562524 (RP11-2E11.5-001)
|
130481491-130484392 | lincRNA | |
|
ENSG00000270823 (MIR335) microRNA 335 |
ENST00000604666 (MIR335-001)
|
130495794-130498427 | antisense | |
|
ENSG00000274500 (MESTIT1_3) MEST intronic transcript 1, antisense RNA conserved region 3 |
ENST00000612234 (MESTIT1_3.1-201)
|
130489868-130489966 | misc_RNA | |
|
ENSG00000277269 (MESTIT1_1) MEST intronic transcript 1, antisense RNA conserved region 1 |
ENST00000618871 (MESTIT1_1.1-201)
|
130487483-130487622 | misc_RNA | |
|
ENSG00000278055 (MESTIT1) MEST intronic transcript 1, antisense RNA |
ENST00000616328 (MESTIT1-201)
|
130488304-130488538 | misc_RNA | |
| CIL_0006OS_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000029790-ENSMUSG00000051855 | CGP | 10090 | 6:30653457-30748455 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000025607 (Copg2) coatomer protein complex, subunit gamma 2 |
ENSMUST00000048774 (Copg2-201)
|
30747554-30896739 | protein_coding | |
|
ENSMUST00000122833 (Copg2-006)
|
30858427-30896730 | retained_intron | ||
|
ENSMUST00000131256 (Copg2-002)
|
30858509-30896710 | processed_transcript | ||
|
ENSMUST00000133916 (Copg2-004)
|
30858803-30896426 | protein_coding | ||
|
ENSMUST00000134137 (Copg2-003)
|
30896115-30896748 | processed_transcript | ||
|
ENSMUST00000135230 (Copg2-001)
|
30858738-30896794 | protein_coding | ||
|
ENSMUST00000151973 (Copg2-005)
|
30894897-30896437 | processed_transcript | ||
|
ENSMUST00000166192 (Copg2-202)
|
30824238-30896739 | protein_coding | ||
|
ENSMUSG00000029790 (Cep41) centrosomal protein 41 |
ENSMUST00000031810 (Cep41-001)
|
30653457-30693749 | protein_coding | |
|
ENSMUST00000115130 (Cep41-003)
|
30679088-30693700 | protein_coding | ||
|
ENSMUST00000115131 (Cep41-002)
|
30654378-30693695 | protein_coding | ||
|
ENSMUST00000132763 (Cep41-009)
|
30654379-30669355 | processed_transcript | ||
|
ENSMUST00000133373 (Cep41-006)
|
30666314-30680533 | protein_coding | ||
|
ENSMUST00000140211 (Cep41-004)
|
30653459-30693693 | nonsense_mediated_decay | ||
|
ENSMUST00000140252 (Cep41-005)
|
30660982-30693088 | processed_transcript | ||
|
ENSMUST00000146951 (Cep41-007)
|
30658382-30661369 | retained_intron | ||
|
ENSMUST00000153107 (Cep41-008)
|
30655532-30656809 | processed_transcript | ||
|
ENSMUST00000169422 (Cep41-010)
|
30666028-30693676 | protein_coding | ||
|
ENSMUSG00000086542 (Gm13782) predicted gene 13782 |
ENSMUST00000149515 (Gm13782-001)
|
30673944-30682266 | antisense | |
|
ENSMUSG00000098260 (Gm27522) predicted gene, 27522 |
ENSMUST00000183949 (Gm27522-201)
|
30734418-30734647 | misc_RNA | |
Expression Patterns
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