C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mesoderm specific transcript
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147400 Mest-004 ENSMUSG00000051855 10090 + 6:30733454-30742836 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PP CIL_0008PP_0002 VISTA 6:30335908-30937352
CIL_0006OS CIL_0006OS_0002 CGP 6:30653457-30748455
CIL_000271 CIL_000271_0002 CGP 6:30723547-30896794

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0008152 IEA metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223215 MEST-001 protein_coding Homo_sapiens 0 547
ENST00000341441 MEST-002 protein_coding Homo_sapiens 0 549
ENST00000378576 MEST-004 protein_coding Homo_sapiens 0 549
ENST00000393187 MEST-201 protein_coding Homo_sapiens 0 547
ENST00000399874 MEST-007 protein_coding Homo_sapiens 0 466
ENST00000412333 MESTP4-001 processed_pseudogene Homo_sapiens 0 375
ENST00000416162 MEST-003 protein_coding Homo_sapiens 0 549
ENST00000421001 MEST-009 protein_coding Homo_sapiens 0 547
ENST00000427521 MEST-006 protein_coding Homo_sapiens 0 547
ENST00000433159 MEST-008 protein_coding Homo_sapiens 0 547
ENST00000437637 MEST-011 protein_coding Homo_sapiens 0 483
ENST00000437945 MEST-005 protein_coding Homo_sapiens 0 547
ENST00000458161 MEST-012 protein_coding Homo_sapiens 0 547
ENST00000462132 MEST-013 processed_transcript Homo_sapiens 0 202
ENST00000475188 MEST-014 retained_intron Homo_sapiens 0 255
ENST00000503460 MESTP3-001 processed_pseudogene Homo_sapiens 0 440
ENST00000559787 MESTP2-001 processed_pseudogene Homo_sapiens 0 342

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