C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Sec31 homolog B (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051984 Sec31b 10090 - 19:44516957-44545864 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063632 Sec31b-001 44516957-44545864 protein_coding
  ENSMUST00000111985 Sec31b-002 44517207-44545847 protein_coding
  ENSMUST00000165758 Sec31b-004 44517644-44520593 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalMuscleOvaryTestisENSMUST00000063632ENSMUST00000111985
Transcript ID Adrenal Muscle Ovary Testis
ENSMUST00000063632 6.171±0.97 11.540±0.64 4.793±1.92 N/A
ENSMUST00000111985 N/A N/A 3.240±0.00 1.013±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QB CIL_0007QB_0002 VISTA 19:44214132-44815870
CIL_00082U CIL_00082U_0002 VISTA 19:44330970-44933041
CIL_00082V CIL_00082V_0002 VISTA 19:44333644-44934226
CIL_00093R CIL_00093R_0002 VISTA 19:44370805-44971431
CIL_00093O CIL_00093O_0002 VISTA 19:44374626-44975238
CIL_0008BC CIL_0008BC_0002 VISTA 19:44398597-45000718
CIL_0005E1 CIL_0005E1_0002 CGP 19:44493472-44545864
CIL_0008BD CIL_0008BD_0002 VISTA 19:44496521-45098014
CIL_0007U1 CIL_0007U1_0002 VISTA 19:44501251-45102539
CIL_0001CC CIL_0001CC_0003 CGP 19:44516957-44552831

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0015031 IEA protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0030120 ISO vesicle coat

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002916 sec31b Sec31 homolog B (S. cerevisiae) protein_coding Danio_rerio
ENSG00000075826 SEC31B SEC31 homolog B (S. cerevisiae) protein_coding Homo_sapiens

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