C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: replication initiator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000009420 Repin1-002 ENSMUSG00000052751 10090 + 6:48593900-48599081 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009420
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009420 3.185±0.93 4.126±0.00 2.401±0.38 3.591±0.00 3.889±0.00 1.652±0.00 4.677±1.51 3.744±2.47 2.132±0.19 1.936±0.71 6.985±3.62 0.768±0.45 0.840±0.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004OE CIL_0004OE_0002 CGP 6:48593883-48623227

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005811 IDA lipid particle
GO:0005829 IDA cytosol
GO:0006260 IEA DNA replication
GO:0022626 IDA cytosolic ribosome
GO:0031965 IDA nuclear membrane
GO:0046872 IEA metal ion binding
GO:2000191 IMP regulation of fatty acid transport
GO:2001273 IMP regulation of glucose import in response to insulin stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247930 ZNF777-001 protein_coding Homo_sapiens 0.00000003 66
ENST00000397281 REPIN1-201 protein_coding Homo_sapiens 0 893
ENST00000425389 REPIN1-018 protein_coding Homo_sapiens 0 894
ENST00000444957 REPIN1-202 protein_coding Homo_sapiens 0 894
ENST00000466559 REPIN1-004 protein_coding Homo_sapiens 0 778
ENST00000473391 REPIN1-005 retained_intron Homo_sapiens 2e-24 117
ENST00000475514 REPIN1-011 protein_coding Homo_sapiens 0 1053
ENST00000478789 ZNF775-002 protein_coding Homo_sapiens 2e-32 143
ENST00000479668 REPIN1-001 protein_coding Homo_sapiens 0 893
ENST00000482680 REPIN1-006 protein_coding Homo_sapiens 0 497
ENST00000488943 REPIN1-012 protein_coding Homo_sapiens 0 1081
ENST00000489432 REPIN1-002 protein_coding Homo_sapiens 0 990
ENST00000495535 REPIN1-007 retained_intron Homo_sapiens 0.000000000000001 88
ENST00000522266 REPIN1-017 nonsense_mediated_decay Homo_sapiens 0 215

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