C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CBP80/20-dependent translation initiation factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052928 Ctif 10090 - 18:75431224-75697696 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000165559 Ctif-201 75431224-75697696 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000165559
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000165559 4.341±2.04 1.981±0.70 3.707±2.54 10.332±7.20 3.267±0.69 2.808±1.44 1.139±0.44 2.153±0.81 1.169±1.18 2.972±0.41 1.092±0.60 4.479±1.68 1.747±1.03 0.448±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008P6 CIL_0008P6_0002 VISTA 18:75201597-75805830
CIL_0007UR CIL_0007UR_0002 VISTA 18:75202363-75803667

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 IEA nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003674 ND molecular_function
GO:0003723 IEA RNA binding
GO:0005737 IEA cytoplasm
GO:0006446 IEA regulation of translational initiation
GO:0048471 IEA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090617 CTIF CBP80/20-dependent translation initiation factor protein_coding Danio_rerio
ENSG00000134030 CTIF CBP80/20-dependent translation initiation factor protein_coding Homo_sapiens

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