C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007UR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm257 VISTA 9606 18:48480781-49082143
GeneTranscriptPositionBiotype
ENSG00000101665 (SMAD7)
SMAD family member 7 		ENST00000262158 (SMAD7-001) 48919853-48950711 protein_coding
ENST00000545051 (SMAD7-003) 48920027-48942807 retained_intron
ENST00000585986 (SMAD7-006) 48921501-48942732 processed_transcript
ENST00000586093 (SMAD7-007) 48921534-48948505 protein_coding
ENST00000587336 (SMAD7-004) 48921411-48930182 processed_transcript
ENST00000588190 (SMAD7-008) 48921641-48933722 processed_transcript
ENST00000589634 (SMAD7-005) 48921372-48950424 protein_coding
ENST00000591805 (SMAD7-002) 48920993-48949333 protein_coding
ENSG00000134030 (CTIF)
CBP80/20-dependent translation initiation factor 		ENST00000256413 (CTIF-001) 48539046-48863217 protein_coding
ENST00000382998 (CTIF-003) 48539158-48861906 protein_coding
ENST00000587752 (CTIF-005) 48539988-48711695 protein_coding
ENST00000587769 (CTIF-010) 48692512-48758229 processed_transcript
ENST00000587860 (CTIF-002) 48760182-48860565 retained_intron
ENST00000588345 (CTIF-006) 48540095-48663812 protein_coding
ENST00000589585 (CTIF-008) 48621444-48711657 processed_transcript
ENST00000590422 (CTIF-011) 48862544-48863208 processed_transcript
ENST00000591387 (CTIF-004) 48539415-48664534 protein_coding
ENST00000591412 (CTIF-007) 48539210-48663811 protein_coding
ENST00000592658 (CTIF-012) 48859882-48862355 processed_transcript
ENSG00000141627 (DYM)
dymeclin 		ENST00000269445 (DYM-001) 49041474-49460802 protein_coding
ENST00000418472 (DYM-011) 49286448-49411941 nonsense_mediated_decay
ENST00000442713 (DYM-002) 49043669-49460665 protein_coding
ENST00000577481 (DYM-005) 49379746-49460638 processed_transcript
ENST00000577734 (DYM-018) 49043804-49097493 protein_coding
ENST00000577836 (DYM-014) 49417939-49460641 processed_transcript
ENST00000578396 (DYM-012) 49321125-49378649 protein_coding
ENST00000578596 (DYM-015) 49363219-49413132 processed_transcript
ENST00000579058 (DYM-019) 49378623-49460627 nonsense_mediated_decay
ENST00000580615 (DYM-013) 49286452-49359872 processed_transcript
ENST00000581409 (DYM-016) 49391610-49460643 processed_transcript
ENST00000581738 (DYM-007) 49286489-49368713 protein_coding
ENST00000582095 (DYM-017) 49391620-49460645 processed_transcript
ENST00000582399 (DYM-003) 49163711-49258408 protein_coding
ENST00000583225 (DYM-009) 49286488-49368697 protein_coding
ENST00000583270 (DYM-021) 49097185-49116189 retained_intron
ENST00000583280 (DYM-008) 49286497-49368707 protein_coding
ENST00000583353 (DYM-006) 49378659-49461347 protein_coding
ENST00000584977 (DYM-004) 49390720-49460714 processed_transcript
ENST00000584983 (DYM-010) 49282168-49368706 protein_coding
ENSG00000264269 (RP11-15F12.1)
 ENST00000584252 (RP11-15F12.1-001) 49023703-49048474 antisense
ENSG00000266905 (RP11-1058N17.1)
 ENST00000587659 (RP11-1058N17.1-001) 48962951-48963941 lincRNA
ENSG00000267762 (RP11-426J5.2)
 ENST00000589818 (RP11-426J5.2-001) 48673575-48688419 antisense
ENSG00000267764 (RP11-484L8.1)
 ENST00000590649 (RP11-484L8.1-001) 48826051-48834770 antisense
ENSG00000278983 (RP11-426J5.3)
 ENST00000624725 (RP11-426J5.3-001) 48564795-48568342 TEC
ENSG00000279250 (RP11-46D1.2)
 ENST00000624979 (RP11-46D1.2-001) 48755693-48756318 TEC
ENSG00000279629 (RP11-426J5.1)
 ENST00000623145 (RP11-426J5.1-001) 48661840-48662635 TEC
ENSG00000280335 (RP11-15F12.6)
 ENST00000624037 (RP11-15F12.6-001) 49013106-49013819 TEC
CIL_0007UR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm257 VISTA 10090 18:75202363-75803667
GeneTranscriptPositionBiotype
ENSMUSG00000025880 (Smad7)
SMAD family member 7 		ENSMUST00000026999 (Smad7-001) 75367529-75395935 protein_coding
ENSMUST00000168918 (Smad7-201) 75368883-75395479 protein_coding
ENSMUST00000172718 (Smad7-004) 75374914-75394001 processed_transcript
ENSMUST00000174411 (Smad7-003) 75369976-75394365 protein_coding
ENSMUST00000174843 (Smad7-002) 75368990-75393986 protein_coding
ENSMUSG00000035765 (Dym)
dymeclin 		ENSMUST00000039608 (Dym-201) 75018772-75286966 protein_coding
ENSMUSG00000052928 (Ctif)
CBP80/20-dependent translation initiation factor 		ENSMUST00000165559 (Ctif-201) 75431224-75697696 protein_coding
ENSMUSG00000092569 (Gm20544)
predicted gene 20544 		ENSMUST00000174338 (Gm20544-001) 75365332-75367088 processed_transcript
ENSMUSG00000097302 (1700034B16Rik)
RIKEN cDNA 1700034B16 gene 		ENSMUST00000180957 (1700034B16Rik-001) 75781032-75782303 lincRNA
ENSMUSG00000097712 (Gm10532)
predicted gene 10532 		ENSMUST00000181913 (Gm10532-201) 75514645-75522806 lincRNA
ENSMUSG00000102047 (RP24-389K16.1)
RIKEN cDNA 2010010A06 gene 		ENSMUST00000185628 (RP24-389K16.1-001) 75288926-75289183 transcribed_processed_pseudogene
ENSMUST00000186356 (RP24-389K16.1-003) 75295675-75297329 processed_transcript
ENSMUST00000190465 (RP24-389K16.1-002) 75288655-75297317 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007UR_0001ENSG00000101665ENST00000262158ENST00000545051ENST00000585986ENST00000586093ENST00000588190ENST00000589634ENST00000591805ENSG00000134030ENST00000256413ENST00000382998ENST00000587752ENST00000587769ENST00000587860ENST00000589585ENSG00000141627ENST00000269445ENST00000418472ENST00000442713ENST00000583270ENST00000584983ENSG00000264269ENST00000584252ENSG00000266905ENST00000587659ENSG00000267762ENST00000589818ENSG00000267764ENST00000590649ENSG00000278983ENST00000624725ENSG00000279250ENST00000624979ENSG00000279629ENST00000623145ENSG00000280335ENST00000624037CIL_0007UR_0002ENSMUSG00000025880ENSMUST00000026999ENSMUST00000168918ENSMUST00000174411ENSMUST00000174843ENSMUSG00000035765ENSMUST00000039608ENSMUSG00000052928ENSMUST00000165559ENSMUSG00000092569ENSMUST00000174338ENSMUSG00000097302ENSMUST00000180957ENSMUSG00000097712ENSMUST00000181913ENSMUSG00000102047ENSMUST00000185628ENSMUST00000186356ENSMUST00000190465
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101665 ENST00000262158 N/A 2.193±0.00 0.616±0.00 0.554±0.01 N/A 2.570±0.00 0.207±0.00 1.519±0.65 0.637±0.00 2.564±0.38 2.088±0.00 3.260±0.91 3.353±1.11 N/A
ENST00000545051 5.046±0.00 4.356±0.00 N/A 0.580±0.00 2.344±0.00 N/A N/A 2.169±0.00 0.541±0.00 N/A N/A 4.164±2.52 6.034±4.29 1.379±0.36
ENST00000585986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.997±0.00 N/A N/A
ENST00000586093 N/A N/A N/A N/A N/A N/A N/A N/A 2.246±0.00 N/A N/A N/A N/A N/A
ENST00000587336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588190 N/A N/A N/A N/A 2.878±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589634 N/A N/A 1.001±0.00 0.871±0.00 2.229±0.00 1.209±0.00 N/A N/A 2.572±0.00 N/A N/A N/A N/A N/A
ENST00000591805 6.823±0.00 N/A 1.843±0.00 1.348±0.57 4.870±0.00 2.614±1.52 0.530±0.00 N/A 1.298±0.45 1.773±0.00 N/A N/A N/A 0.417±0.00
ENSG00000134030 ENST00000256413 N/A N/A 0.271±0.00 19.123±0.00 7.746±0.00 7.348±0.00 1.278±0.92 N/A 2.523±1.23 1.473±1.25 4.215±0.00 11.736±6.98 5.606±1.03 2.956±0.00
ENST00000382998 7.302±0.00 2.361±0.00 N/A 6.057±4.99 14.312±0.00 2.884±0.00 3.438±0.00 4.737±0.00 1.373±0.00 N/A 4.085±0.00 7.467±5.48 3.162±1.86 3.949±0.07
ENST00000587752 N/A N/A 2.529±0.00 N/A 3.597±0.00 N/A N/A N/A 6.551±0.00 N/A N/A 4.184±0.00 N/A N/A
ENST00000587769 N/A N/A 2.424±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587860 N/A N/A 0.679±0.00 N/A 0.806±0.00 N/A 0.279±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000588345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.315±0.00 N/A N/A N/A
ENST00000590422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000141627 ENST00000269445 4.626±0.00 3.740±0.00 N/A 3.872±2.44 1.636±0.62 1.986±0.00 2.614±1.89 N/A 2.527±2.12 1.248±0.56 4.639±1.45 4.259±3.22 1.682±0.61 4.093±1.94
ENST00000418472 N/A N/A N/A 4.266±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442713 5.078±0.00 2.086±0.00 N/A 3.801±0.00 2.604±0.83 2.953±1.02 3.722±2.02 3.053±1.84 4.369±0.73 4.144±2.74 7.369±4.89 4.646±1.80 3.579±0.59 10.047±0.47
ENST00000577481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.429±0.00
ENST00000583280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.840±0.00 16.205±0.00
ENSG00000264269 ENST00000584252 N/A N/A 0.152±0.00 N/A N/A 0.048±0.00 0.120±0.00 0.157±0.00 N/A 0.173±0.00 N/A 0.370±0.24 N/A 0.086±0.00
ENSG00000266905 ENST00000587659 N/A 0.181±0.00 N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A N/A 0.109±0.00 N/A 0.205±0.00
ENSG00000267762 ENST00000589818 N/A 0.053±0.00 N/A 0.063±0.00 N/A N/A 0.205±0.00 N/A 0.093±0.00 N/A N/A 0.136±0.00 N/A 0.740±0.64
ENSG00000267764 ENST00000590649 0.132±0.00 N/A 0.102±0.00 0.037±0.00 0.182±0.08 0.602±0.00 0.062±0.01 0.211±0.05 0.198±0.00 N/A N/A 0.050±0.01 0.028±0.00 0.016±0.00
ENSG00000278983 ENST00000624725 0.697±0.00 0.267±0.00 0.369±0.00 0.204±0.15 0.462±0.00 0.360±0.02 0.070±0.03 0.072±0.03 0.124±0.12 0.157±0.04 0.050±0.00 0.194±0.08 0.105±0.00 0.169±0.09
ENSG00000279250 ENST00000624979 N/A 0.023±0.00 0.065±0.00 0.230±0.16 0.120±0.02 0.696±0.00 0.250±0.00 N/A 0.419±0.00 0.886±0.00 1.048±0.00 0.133±0.10 N/A 0.255±0.00
ENSG00000279629 ENST00000623145 N/A N/A N/A N/A 0.170±0.00 N/A 0.455±0.00 N/A 0.300±0.25 N/A N/A 0.109±0.00 N/A N/A
ENSG00000280335 ENST00000624037 N/A N/A N/A N/A N/A 0.131±0.00 N/A N/A N/A 1.295±0.00 N/A 5.699±3.48 1.178±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025880 ENSMUST00000026999 2.795±0.88 2.102±0.83 4.603±0.32 1.777±1.26 5.103±2.06 8.596±1.57 3.215±0.80 5.611±0.68 0.952±0.35 17.242±0.52 1.357±0.28 4.371±1.53 6.054±2.77 0.165±0.02
ENSMUST00000168918 1.903±0.40 N/A 2.147±0.00 N/A 3.774±0.71 N/A 2.877±0.55 3.823±1.02 1.252±0.25 7.894±1.04 0.761±0.14 N/A 4.980±0.90 0.155±0.01
ENSMUST00000172718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174411 N/A N/A N/A 5.922±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174843 5.367±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 19.114±0.00 N/A N/A N/A N/A
ENSMUSG00000035765 ENSMUST00000039608 7.800±0.34 10.820±3.16 5.402±1.93 7.682±4.54 6.527±1.50 12.903±1.79 12.471±2.59 4.818±1.18 5.574±2.44 9.615±0.59 29.335±1.61 6.511±1.80 7.159±3.03 20.179±10.05
ENSMUSG00000052928 ENSMUST00000165559 4.341±2.04 1.981±0.70 3.707±2.54 10.332±7.20 3.267±0.69 2.808±1.44 1.139±0.44 2.153±0.81 1.169±1.18 2.972±0.41 1.092±0.60 4.479±1.68 1.747±1.03 0.448±0.04
ENSMUSG00000092569 ENSMUST00000174338 0.609±0.25 4.348±1.31 1.449±0.16 0.856±0.00 1.022±0.59 1.306±0.37 N/A 1.269±0.25 1.115±0.35 2.281±0.51 N/A 1.879±1.01 1.435±1.08 0.225±0.05
ENSMUSG00000097302 ENSMUST00000180957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.081±0.24
ENSMUSG00000097712 ENSMUST00000181913 N/A N/A N/A 4.409±0.00 N/A N/A N/A N/A N/A 1.173±0.00 0.607±0.12 1.980±0.20 1.824±0.72 2.592±1.21
ENSMUSG00000102047 ENSMUST00000185628 N/A N/A 0.092±0.00 1.108±0.54 N/A N/A N/A N/A N/A 0.849±0.00 N/A 1.698±0.00 0.431±0.29 0.573±0.22
ENSMUST00000186356 N/A N/A N/A 0.140±0.00 0.105±0.05 0.892±0.00 N/A N/A 0.014±0.00 0.076±0.00 N/A 0.283±0.16 0.083±0.03 N/A
ENSMUST00000190465 N/A 0.110±0.00 N/A 0.021±0.01 0.108±0.03 0.906±0.00 N/A N/A 0.024±0.01 0.063±0.00 0.084±0.03 0.348±0.15 0.133±0.06 N/A

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