C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Kv channel-interacting protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000053519 Kcnip1 10090 - 11:33629339-33993152 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000065970 Kcnip1-002 33629790-33843527 protein_coding
  ENSMUST00000101368 Kcnip1-003 33629339-33843461 protein_coding
  ENSMUST00000109340 Kcnip1-001 33629790-33843585 protein_coding
  ENSMUST00000135034 Kcnip1-004 33641504-33992988 processed_transcript
  ENSMUST00000154760 Kcnip1-005 33641180-33993152 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000065970ENSMUST00000101368ENSMUST00000109340ENSMUST00000135034ENSMUST00000154760
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065970 2.865±0.26 N/A 11.083±6.16 0.025±0.00 0.455±0.07 0.047±0.03 N/A 0.094±0.05 0.036±0.01 0.014±0.00 0.392±0.11 0.036±0.02 0.711±0.30
ENSMUST00000101368 N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A 0.031±0.00 N/A 0.186±0.07 0.045±0.00 0.164±0.01
ENSMUST00000109340 N/A 1.128±0.58 6.028±2.14 N/A N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000135034 1.020±0.00 0.065±0.00 N/A N/A 0.837±0.21 0.021±0.01 0.026±0.00 0.014±0.00 N/A 0.018±0.00 0.244±0.00 N/A N/A
ENSMUST00000154760 0.332±0.44 N/A N/A 0.032±0.02 0.123±0.00 0.014±0.00 0.034±0.00 0.011±0.01 0.049±0.03 0.009±0.00 0.338±0.11 0.035±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088M CIL_00088M_0002 VISTA 11:33042866-33643782
CIL_000977 CIL_000977_0002 VISTA 11:33092412-33693558
CIL_00098H CIL_00098H_0002 VISTA 11:33099828-33701076
CIL_0008SG CIL_0008SG_0002 VISTA 11:33129906-33731024
CIL_00023U CIL_00023U_0002 CGP 11:33629339-33993152

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005244 IEA voltage-gated ion channel activity
GO:0005267 IEA potassium channel activity
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0015459 IEA potassium channel regulator activity
GO:0030425 IEA dendrite
GO:0034705 IEA potassium channel complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043025 IEA neuronal cell body
GO:0044325 IEA ion channel binding
GO:0045760 IEA positive regulation of action potential
GO:0046982 IEA protein heterodimerization activity
GO:0047485 IEA protein N-terminus binding
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022109 kcnip1a Kv channel interacting protein 1 a protein_coding Danio_rerio
ENSDARG00000034808 kcnip1b Kv channel interacting protein 1 b protein_coding Danio_rerio
ENSG00000182132 KCNIP1 Kv channel interacting protein 1 protein_coding Homo_sapiens

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