C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Kv channel-interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154760 Kcnip1-005 ENSMUSG00000053519 10090 - 11:33641180-33993152 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000154760
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000154760 0.332±0.44 0.032±0.02 0.123±0.00 0.014±0.00 0.034±0.00 0.011±0.01 0.049±0.03 0.009±0.00 0.338±0.11 0.035±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088M CIL_00088M_0002 VISTA 11:33042866-33643782
CIL_000977 CIL_000977_0002 VISTA 11:33092412-33693558
CIL_00098H CIL_00098H_0002 VISTA 11:33099828-33701076
CIL_0008SG CIL_0008SG_0002 VISTA 11:33129906-33731024
CIL_00023U CIL_00023U_0002 CGP 11:33629339-33993152

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328939 KCNIP1-001 protein_coding Homo_sapiens 0 248
ENST00000377360 KCNIP1-005 protein_coding Homo_sapiens 0 468
ENST00000390656 KCNIP1-201 protein_coding Homo_sapiens 0 257
ENST00000411494 KCNIP1-004 protein_coding Homo_sapiens 0 248
ENST00000434108 KCNIP1-003 protein_coding Homo_sapiens 0 257
ENST00000517344 KCNIP1-007 nonsense_mediated_decay Homo_sapiens 0 244
ENST00000518527 KCNIP1-006 processed_transcript Homo_sapiens 0 329
ENST00000520740 KCNIP1-002 protein_coding Homo_sapiens 0 248
ENST00000616807 KCNIP1-202 protein_coding Homo_sapiens 0 248

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