C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: keratin 16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000053797 Krt16 10090 - 11:100246091-100248902 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000007280 Krt16-001 100246091-100248902 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonLiverLungMusclePlacentaENSMUST00000007280
Transcript ID Bladder Brain Breast Colon Liver Lung Muscle Placenta
ENSMUST00000007280 0.003±0.00 0.056±0.02 0.048±0.02 0.175±0.12 0.003±0.00 0.297±0.02 0.033±0.00 0.225±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_0012 CGP 11:100203162-100248902
CIL_00056U CIL_00056U_0016 CGP 11:100246091-100261029

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005200 IDA structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005856 IEA cytoskeleton
GO:0005882 IDA intermediate filament
GO:0007568 IEA aging
GO:0030336 IEA negative regulation of cell migration
GO:0042633 IEA hair cycle
GO:0045104 IDA intermediate filament cytoskeleton organization
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000212 zgc:92061 zgc:92061 protein_coding Danio_rerio
ENSDARG00000014356 zgc:92035 zgc:92035 protein_coding Danio_rerio
ENSDARG00000022334 BX469912.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000023082 krt1-19d keratin, type 1, gene 19d protein_coding Danio_rerio
ENSDARG00000036832 cyt1l type I cytokeratin, enveloping layer, like protein_coding Danio_rerio
ENSDARG00000036834 zgc:109868 zgc:109868 protein_coding Danio_rerio
ENSDARG00000036840 krt15 keratin 15 protein_coding Danio_rerio
ENSDARG00000044975 zgc:153629 zgc:153629 protein_coding Danio_rerio
ENSDARG00000044976 zgc:136902 zgc:136902 protein_coding Danio_rerio
ENSDARG00000090268 si:dkeyp-113d7.4 si:dkeyp-113d7.4 protein_coding Danio_rerio
ENSDARG00000092947 cyt1 type I cytokeratin, enveloping layer protein_coding Danio_rerio
ENSDARG00000094041 krt17 keratin 17 protein_coding Danio_rerio
ENSDARG00000095147 wu:fb17f05 wu:fb17f05 protein_coding Danio_rerio
ENSG00000186832 KRT16 keratin 16 protein_coding Homo_sapiens

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