C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: keratin 16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000186832 KRT16 9606 - 17:41609778-41615899 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301653 KRT16-001 41609778-41612753 protein_coding
  ENST00000588319 KRT16-002 41611766-41612765 retained_intron
  ENST00000590990 KRT16-004 41612543-41615899 protein_coding
  ENST00000593067 KRT16-003 41610409-41612899 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000301653ENST00000588319ENST00000593067
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000301653 1.827±0.00 N/A 2.181±1.85 0.363±0.00 0.182±0.00 0.036±0.00 0.016±0.00 0.720±0.37 1.963±0.00 59.510±62.68 1.262±0.96 0.145±0.00
ENST00000588319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.00
ENST00000593067 N/A 0.090±0.00 4.836±4.57 N/A 0.059±0.00 0.174±0.00 0.106±0.00 N/A N/A 228.250±222.74 0.607±0.22 0.095±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_000N CGP 17:41582279-41615899
CIL_00056U CIL_00056U_000M CGP 17:41609778-41624842

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005200 NAS structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005856 IDA cytoskeleton
GO:0005882 NAS:IEA intermediate filament
GO:0007010 NAS cytoskeleton organization
GO:0007568 IDA aging
GO:0008283 TAS cell proliferation
GO:0008544 TAS epidermis development
GO:0030336 IDA negative regulation of cell migration
GO:0042633 IDA hair cycle
GO:0045104 IEA intermediate filament cytoskeleton organization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000212 zgc:92061 zgc:92061 protein_coding Danio_rerio
ENSDARG00000014356 zgc:92035 zgc:92035 protein_coding Danio_rerio
ENSDARG00000022334 BX469912.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000023082 krt1-19d keratin, type 1, gene 19d protein_coding Danio_rerio
ENSDARG00000036832 cyt1l type I cytokeratin, enveloping layer, like protein_coding Danio_rerio
ENSDARG00000036834 zgc:109868 zgc:109868 protein_coding Danio_rerio
ENSDARG00000036840 krt15 keratin 15 protein_coding Danio_rerio
ENSDARG00000044975 zgc:153629 zgc:153629 protein_coding Danio_rerio
ENSDARG00000044976 zgc:136902 zgc:136902 protein_coding Danio_rerio
ENSDARG00000090268 si:dkeyp-113d7.4 si:dkeyp-113d7.4 protein_coding Danio_rerio
ENSDARG00000092947 cyt1 type I cytokeratin, enveloping layer protein_coding Danio_rerio
ENSDARG00000094041 krt17 keratin 17 protein_coding Danio_rerio
ENSDARG00000095147 wu:fb17f05 wu:fb17f05 protein_coding Danio_rerio
ENSMUSG00000053797 Krt16 keratin 16 protein_coding Mus_musculus

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