C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 120B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067505 Tmem120b-001 ENSMUSG00000054434 10090 + 5:123076275-123117749 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067505
Transcript ID Adipose Adrenal Bladder Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067505 35.220±15.49 6.162±3.09 2.341±0.72 21.447±3.62 2.122±0.75 3.840±0.49 4.761±5.00 3.633±0.59 4.592±0.53 2.796±1.27 4.746±3.01 0.171±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074R CIL_00074R_0003 CGP 5:123035769-123117749
CIL_0000F9 CIL_0000F9_0003 CGP 5:123068415-123132692

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342607 TMEM120B-001 nonsense_mediated_decay Homo_sapiens 0 1387
ENST00000417509 TMEM120A-003 protein_coding Homo_sapiens 0 248
ENST00000431867 TMEM120A-006 processed_transcript Homo_sapiens 2e-38 163
ENST00000439537 TMEM120A-004 protein_coding Homo_sapiens 0 435
ENST00000440632 TMEM120A-002 nonsense_mediated_decay Homo_sapiens 0 248
ENST00000449592 TMEM120B-002 protein_coding Homo_sapiens 0 1330
ENST00000465989 TMEM120A-014 retained_intron Homo_sapiens 0.0000000000004 79
ENST00000480899 TMEM120A-012 protein_coding Homo_sapiens 0 370
ENST00000484946 TMEM120A-016 retained_intron Homo_sapiens 0.0000000000006 79
ENST00000493111 TMEM120A-001 protein_coding Homo_sapiens 0 435
ENST00000540377 TMEM120B-006 protein_coding Homo_sapiens 0 470
ENST00000541467 TMEM120B-003 protein_coding Homo_sapiens 0 822

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