C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 120B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161049 Tmem120b-006 ENSMUSG00000054434 10090 + 5:123099901-123115819 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENSMUST00000161049
Transcript ID Breast
ENSMUST00000161049 23.192±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074R CIL_00074R_0003 CGP 5:123035769-123117749
CIL_0000F9 CIL_0000F9_0003 CGP 5:123068415-123132692

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342607 TMEM120B-001 nonsense_mediated_decay Homo_sapiens 0 743
ENST00000417509 TMEM120A-003 protein_coding Homo_sapiens 0 231
ENST00000431867 TMEM120A-006 processed_transcript Homo_sapiens 2e-38 163
ENST00000439537 TMEM120A-004 protein_coding Homo_sapiens 0 418
ENST00000440632 TMEM120A-002 nonsense_mediated_decay Homo_sapiens 0 231
ENST00000449592 TMEM120B-002 protein_coding Homo_sapiens 0 743
ENST00000465989 TMEM120A-014 retained_intron Homo_sapiens 0.00000000000003 82
ENST00000480899 TMEM120A-012 protein_coding Homo_sapiens 0 353
ENST00000484946 TMEM120A-016 retained_intron Homo_sapiens 0.00000000000005 82
ENST00000493111 TMEM120A-001 protein_coding Homo_sapiens 0 418
ENST00000540377 TMEM120B-006 protein_coding Homo_sapiens 0 226
ENST00000541467 TMEM120B-003 protein_coding Homo_sapiens 0 640

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