C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: threonine synthase-like 2 (bacterial)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074241 Thnsl2-002 ENSMUSG00000054474 10090 - 6:71128398-71144338 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074241
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074241 6.196±3.44 3.016±0.00 1.606±0.45 1.013±0.36 2.886±1.25 4.791±0.00 1.620±0.37 62.572±15.24 4.780±2.58 1.994±0.65 3.352±0.72 3.848±2.21 7.745±8.99 1.148±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Q8 CIL_0004Q8_0002 CGP 6:71128166-71205023

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0009071 IDA serine family amino acid catabolic process
GO:0016311 IDA dephosphorylation
GO:0016829 IEA lyase activity
GO:0030170 IDA pyridoxal phosphate binding
GO:0046360 IDA 2-oxobutyrate biosynthetic process
GO:0070905 IDA serine binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324166 THNSL2-001 protein_coding Homo_sapiens 0 1500
ENST00000343544 THNSL2-002 protein_coding Homo_sapiens 0 1188
ENST00000377254 THNSL2-201 protein_coding Homo_sapiens 0 745
ENST00000419759 THNSL2-005 protein_coding Homo_sapiens 0 416
ENST00000449349 THNSL2-004 protein_coding Homo_sapiens 0 754
ENST00000464022 THNSL2-006 retained_intron Homo_sapiens 0 324
ENST00000475910 THNSL2-003 retained_intron Homo_sapiens 0 508
ENST00000476349 THNSL2-007 retained_intron Homo_sapiens 0 366
ENST00000496165 THNSL2-009 processed_transcript Homo_sapiens 0 324
ENST00000496844 THNSL2-008 processed_transcript Homo_sapiens 0 760

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