C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pecanex-like 3 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054874 Pcnxl3 10090 - 19:5664635-5688908 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068169 Pcnxl3-004 5664640-5688149 protein_coding
  ENSMUST00000113615 Pcnxl3-001 5664635-5688908 protein_coding
  ENSMUST00000124905 Pcnxl3-012 5665236-5666198 retained_intron
  ENSMUST00000127876 Pcnxl3-008 5678983-5683343 protein_coding
  ENSMUST00000132420 Pcnxl3-011 5665991-5666526 retained_intron
  ENSMUST00000133136 Pcnxl3-013 5665416-5666982 nonsense_mediated_decay
  ENSMUST00000135119 Pcnxl3-003 5683741-5688695 retained_intron
  ENSMUST00000137313 Pcnxl3-010 5674923-5679577 protein_coding
  ENSMUST00000141577 Pcnxl3-007 5679403-5683873 protein_coding
  ENSMUST00000145270 Pcnxl3-005 5673292-5684669 protein_coding
  ENSMUST00000146638 Pcnxl3-006 5664638-5673947 retained_intron
  ENSMUST00000147161 Pcnxl3-009 5679934-5681536 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068169ENSMUST00000113615ENSMUST00000127876ENSMUST00000135119ENSMUST00000145270ENSMUST00000146638
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068169 12.837±0.68 12.487±3.09 5.484±0.79 10.810±3.93 14.485±6.31 16.451±2.19 4.291±1.76 12.426±2.70 4.552±1.41 15.351±2.03 0.708±0.06 27.844±10.40 5.124±0.31 5.933±3.04
ENSMUST00000113615 9.179±2.35 20.800±2.75 4.158±0.49 9.101±2.89 10.482±5.00 16.397±1.82 1.778±0.43 7.499±1.26 3.799±1.03 12.253±0.72 2.308±0.56 11.887±3.98 7.595±5.15 5.962±1.73
ENSMUST00000127876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.608±0.00 N/A N/A
ENSMUST00000135119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.938±0.00 N/A N/A
ENSMUST00000145270 N/A 22.102±0.00 N/A N/A 14.542±5.56 17.049±0.41 1.992±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146638 N/A 20.325±3.78 5.662±0.44 5.357±0.12 14.415±0.00 19.442±5.40 N/A N/A 4.195±1.45 11.661±1.63 1.302±0.12 3.998±0.00 5.491±2.40 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019501 pcnxl3 pecanex-like 3 (Drosophila) protein_coding Danio_rerio
ENSG00000197136 PCNXL3 pecanex-like 3 (Drosophila) protein_coding Homo_sapiens

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