C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pecanex-like 3 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000068169 Pcnxl3-004 ENSMUSG00000054874 10090 - 19:5664640-5688149 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068169
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068169 12.837±0.68 12.487±3.09 5.484±0.79 10.810±3.93 14.485±6.31 16.451±2.19 4.291±1.76 12.426±2.70 4.552±1.41 15.351±2.03 0.708±0.06 27.844±10.40 5.124±0.31 5.933±3.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355703 PCNXL3-001 protein_coding Homo_sapiens 0 5389
ENST00000439247 PCNXL3-003 retained_intron Homo_sapiens 0 3258
ENST00000530174 PCNXL3-002 retained_intron Homo_sapiens 0 601
ENST00000531045 PCNXL3-004 processed_transcript Homo_sapiens 0.000000000000002 86
ENST00000531280 PCNXL3-005 processed_transcript Homo_sapiens 0 265

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