C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pecanex-like 3 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146638 Pcnxl3-006 ENSMUSG00000054874 10090 - 19:5664638-5673947 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonLiverLungMuscleOvaryPlacentaENSMUST00000146638
Transcript ID Adrenal Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta
ENSMUST00000146638 20.325±3.78 5.662±0.44 5.357±0.12 14.415±0.00 19.442±5.40 4.195±1.45 11.661±1.63 1.302±0.12 3.998±0.00 5.491±2.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355703 PCNXL3-001 protein_coding Homo_sapiens 0 2953
ENST00000439247 PCNXL3-003 retained_intron Homo_sapiens 0 2844
ENST00000531280 PCNXL3-005 processed_transcript Homo_sapiens 0 265

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