C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pecanex-like 3 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113615 Pcnxl3-001 ENSMUSG00000054874 10090 - 19:5664635-5688908 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113615
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113615 9.179±2.35 20.800±2.75 4.158±0.49 9.101±2.89 10.482±5.00 16.397±1.82 1.778±0.43 7.499±1.26 3.799±1.03 12.253±0.72 2.308±0.56 11.887±3.98 7.595±5.15 5.962±1.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355703 PCNXL3-001 protein_coding Homo_sapiens 0 7849
ENST00000439247 PCNXL3-003 retained_intron Homo_sapiens 0 3258
ENST00000530174 PCNXL3-002 retained_intron Homo_sapiens 0 601
ENST00000531045 PCNXL3-004 processed_transcript Homo_sapiens 0.000000000000002 86
ENST00000531280 PCNXL3-005 processed_transcript Homo_sapiens 0 265

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