C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine-rich repeats and transmembrane domains 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055003 Lrtm2 10090 - 6:119315133-119330766 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068351 Lrtm2-001 119315133-119330766 protein_coding
  ENSMUST00000112756 Lrtm2-002 119315133-119330757 protein_coding
  ENSMUST00000124192 Lrtm2-003 119323649-119329204 protein_coding
  ENSMUST00000168793 Lrtm2-201 119315133-119329204 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068351ENSMUST00000112756ENSMUST00000124192ENSMUST00000168793
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068351 N/A N/A N/A N/A N/A N/A N/A 0.227±0.00 N/A N/A 0.097±0.00 0.164±0.04 N/A N/A
ENSMUST00000112756 0.150±0.10 N/A 0.039±0.00 6.991±4.08 0.238±0.10 0.034±0.00 0.192±0.03 0.432±0.08 0.020±0.00 1.616±0.27 0.628±0.33 0.288±0.12 0.067±0.06 N/A
ENSMUST00000124192 N/A N/A N/A N/A N/A 0.220±0.00 N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A
ENSMUST00000168793 0.286±0.16 0.060±0.05 0.023±0.00 N/A 0.123±0.05 0.085±0.03 0.150±0.08 0.959±0.22 0.034±0.03 0.731±0.00 0.457±0.19 0.253±0.18 0.018±0.01 0.043±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XJ CIL_0003XJ_0003 CGP 6:119236526-119352407

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045483 lrtm2 leucine-rich repeats and transmembrane domains 2 protein_coding Danio_rerio
ENSG00000166159 LRTM2 leucine-rich repeats and transmembrane domains 2 protein_coding Homo_sapiens

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